RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SDC1P18827 310 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 PTGER1P34995 402 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 SOX3P41225 446 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 RPL14P50914 215 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 RPL38P63173 70 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 BST1Q10588 318 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 EBPQ15125 230 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 LTB4RQ15722 352 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 MAPKAPK3Q16644 382 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF324BQ6AW86 544 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 OPN5Q6U736 354 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 FAM180AQ6UWF9 173 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 IL20RBQ6UXL0 311 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 GALNTL5Q7Z4T8 443 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 TICAM1Q8IUC6 712 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 CYP4Z2PQ8N1L4 340 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 VWA5B2Q8N398 1253 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC15A4Q8N697 577 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF441Q8N8Z8 693 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 ADCY4Q8NFM4 1077 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF675Q8TD23 568 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 TP53INP1Q96A56 240 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 TMEM125Q96AQ2 219 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 SH3GL2Q99962 352 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 BRINP2Q9C0B6 783 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 WWTR1Q9GZV5 400 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 MIEF1Q9NQG6 463 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 GIMAP4Q9NUV9 329 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 HPF1Q9NWY4 346 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 GIMAP2Q9UG22 337 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 BAIAP2L1Q9UHR4 511 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 ERVK-11Q9UQG0 969 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 ENTPD4Q9Y227 616 aa11.73□□□□□ -0.53
CCDC90B-216ENST00000529856 C2orf92A0A1B0GVN3 265 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ATP6AP2A0A1C7CYW4 349 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 NME2P1O60361 137 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ATP6AP2O75787 350 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 CBX6O95503 412 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 NADKO95544 446 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 BCKDHAP12694 445 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 PCSK2P16519 638 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 NME2P22392 152 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 MPIP34949 423 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ATP6AP1LQ52LC2 224 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 TRMT12Q53H54 448 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF628Q5EBL2 1059 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 C6orf136Q5SQH8 315 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 LYPD8Q6UX82 237 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 KIRREL3Q8IZU9 778 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 C16orf52Q8NHV5 167 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 SLC22A8Q8TCC7 542 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ADIPOR1Q96A54 375 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ERP27Q96DN0 273 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ATP6V1G3Q96LB4 118 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 TSSK3Q96PN8 268 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 BBS4Q96RK4 519 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 GAL3ST4Q96RP7 486 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 TIMMDC1Q9NPL8 285 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 OLAHQ9NV23 265 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 BCAP29Q9UHQ4 241 aa11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 KLF13Q9Y2Y9 288 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-216ENST00000529856 ASPDHA6ND91 283 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 TBX19O60806 448 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 SNNO75324 88 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 BCAS2O75934 225 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 CBX7O95931 251 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 JUNP05412 331 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 EDN3P14138 238 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 GNLYP22749 145 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 MAPK1P28482 360 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 ASMTP46597 345 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 UQCRFS1P47985 274 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 MRPS35P82673 323 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 PMP22Q01453 160 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 DUSP8Q13202 625 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 EXOSC7Q15024 291 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 PDCD2Q16342 344 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 ZNF791Q3KP31 576 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 TTMPQ5BVD1 217 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 HLA-DQA1Q5Y7H0 255 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 ATG16L1Q676U5 607 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 RTL4Q6ZR62 310 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 SULF2Q8IWU5 870 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 TRIM42Q8IWZ5 723 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 FAM9CQ8IZT9 166 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 FAM98AQ8NCA5 519 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 ST6GALNAC3Q8NDV1 305 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 SIMC1Q8NDZ2 872 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 C17orf47Q8NEP4 570 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 OR9A2Q8NGT5 310 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 RAB3IL1Q8TBN0 382 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 NR4A3Q92570 626 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 KAT2AQ92830 837 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 TUBGCP3Q96CW5 907 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms