RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CCND3P30281 292 aaPredicted RBP5.13□□□□□ -1.59
PCF11-202ENST00000528336 GMPSP49915 693 aaPredicted RBP5.13□□□□□ -1.59
PCF11-202ENST00000528336 SMSP52788 366 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 PRMT2P55345 433 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 RPS8P62241 208 aaKnown RBP5.13□□□□□ -1.59
PCF11-202ENST00000528336 HSPA14Q0VDF9 509 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 VEZF1Q14119 521 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 UGT3A2Q3SY77 523 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 C20orf194Q5TEA3 1177 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 KCTD11Q693B1 232 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 PODNL1Q6PEZ8 512 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 DLEU7Q6UYE1 221 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 TMCO2Q7Z6W1 182 aaPredicted RBP5.13□□□□□ -1.59
PCF11-202ENST00000528336 BIVMQ86UB2 503 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 RNF148Q8N7C7 305 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 GBP7Q8N8V2 638 aaPredicted RBP5.13□□□□□ -1.59
PCF11-202ENST00000528336 OR2T11Q8NH01 316 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 GOLGA5Q8TBA6 731 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 HCAR2Q8TDS4 363 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 CKAP2Q8WWK9 683 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 SELENOMQ8WWX9 145 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 AZIN2Q96A70 460 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 SLCO4A1Q96BD0 722 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 MUS81Q96NY9 551 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 CAPS2Q9BXY5 557 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 TSPYL1Q9H0U9 437 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 TMEM245Q9H330 911 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 KCNK13Q9HB14 408 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 KCNMB3Q9NPA1 279 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 POLLQ9UGP5 575 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 PYGO1Q9Y3Y4 419 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 AP4B1Q9Y6B7 739 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 SHANK3Q9BYB0 1731 aa5.13□□□□□ -1.59
PCF11-202ENST00000528336 KDM6AO15550 1401 aaPredicted RBP5.13□□□□□ -1.59
PCF11-202ENST00000528336 IGHV4-4A0A075B6R2 117 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 ANKDD1BA6NHY2 528 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 XPO1O14980 1071 aaKnown RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 ACSL3O95573 720 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 IGLV1-44P01699 117 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 IGHEP01854 428 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 RAF1P04049 648 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 IGHV4-31P0DP07 118 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 ZNF26P17031 533 aaPredicted RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 CYP11B2P19099 503 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 DRD5P21918 477 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 EEF1B2P24534 225 aaKnown RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 CYP2F1P24903 491 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 PKLRP30613 574 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 LONP1P36776 959 aaKnown RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 MAGEA11P43364 429 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 SNRPD1P62314 119 aaKnown RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 ITGA9Q13797 1035 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 CCDC6Q16204 474 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 C14orf177Q52M58 125 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 TMEM41BQ5BJD5 291 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.12□□□□□ -1.59
PCF11-202ENST00000528336 AP1ARQ63HQ0 302 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 PRR27Q6MZM9 219 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 BHLHB9Q6PI77 547 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 ZDHHC21Q8IVQ6 265 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 LGI2Q8N0V4 545 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 FAM71CQ8NEG0 241 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 OR52B4Q8NGK2 314 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 DQX1Q8TE96 717 aaKnown RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 ATP8B4Q8TF62 1192 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 PIGBQ92521 554 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 NSMAFQ92636 917 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 RIT1Q92963 219 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 TMIGD2Q96BF3 282 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 RASD2Q96D21 266 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 LRRC39Q96DD0 335 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 BSCL2Q96G97 398 aaPredicted RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 SLC41A3Q96GZ6 507 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 C7orf34Q96L11 122 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 FAM20AQ96MK3 541 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 JPH2Q9BR39 696 aaPredicted RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 MRPL37Q9BZE1 423 aaKnown RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 DDX47Q9H0S4 455 aaKnown RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 C8orf33Q9H7E9 229 aaPredicted RBP5.12□□□□□ -1.59
PCF11-202ENST00000528336 FGF22Q9HCT0 170 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 HYPKQ9NX55 129 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 TNNQ9UQP3 1299 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 CEMIPQ8WUJ3 1361 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 MRC1P22897 1456 aa5.12□□□□□ -1.59
PCF11-202ENST00000528336 A0A087WW49 117 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 ZNF879B4DU55 563 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 K7EQM0 130 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 PRRG1O14668 218 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 LRRTM2O43300 516 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 B4GALT2O60909 372 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 HSF2BPO75031 334 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 CRCPO75575 148 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 AP2A2O94973 939 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 AGTP01019 485 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 GPIP06744 558 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 SBK2P0C263 348 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 UQCRFS1P1P0C7P4 283 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 CLUP10909 449 aa5.11□□□□□ -1.59
PCF11-202ENST00000528336 HNRNPFP52597 415 aaKnown RBP5.11□□□□□ -1.59
PCF11-202ENST00000528336 MAZP56270 477 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms