RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 LRRC42Q9Y546 428 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 HAT1O14929 419 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 TLX2O43763 284 aaPredicted RBP14.27□□□□□ -0.12
USP47-207ENST00000527733 GPR75O95800 540 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 SLC6A6P31641 620 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 CSNK1G2P78368 415 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 DCTN2Q13561 401 aaKnown RBP14.27□□□□□ -0.12
USP47-207ENST00000527733 SYT13Q7L8C5 426 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 OR9A4Q8NGU2 314 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 ZBTB20Q9HC78 741 aaPredicted RBP14.27□□□□□ -0.12
USP47-207ENST00000527733 MRPS7Q9Y2R9 242 aaKnown RBP14.27□□□□□ -0.12
USP47-207ENST00000527733 A0A1W2PPC4 97 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 PGRMC2O15173 223 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 TRAPPC6AO75865 159 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 FNTBP49356 437 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 MAVSQ7Z434 540 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 ZNF440Q8IYI8 595 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 MAELQ96JY0 434 aaKnown RBP14.27□□□□□ -0.13
USP47-207ENST00000527733 CMKLR1Q99788 373 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 POLR2J2Q9GZM3 115 aaKnown RBP14.27□□□□□ -0.13
USP47-207ENST00000527733 BLOC1S5-TXNDC5H3BN57 136 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 LDB3O75112 727 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 C7P10643 843 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 ETS2P15036 469 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 PCGF2P35227 344 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 EXOC3L2Q2M3D2 409 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 GHDCQ8N2G8 530 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 MCFD2Q8NI22 146 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 CEP76Q8TAP6 659 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 FKBP10Q96AY3 582 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 CHCHD6Q9BRQ6 235 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 GAREM1Q9H706 876 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 ZNF304Q9HCX3 659 aa14.27□□□□□ -0.13
USP47-207ENST00000527733 AIREO43918 545 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 HPRP00739 348 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 COX10Q12887 443 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 ANGPT1Q15389 498 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 Q6ZS52 159 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 SH2D5Q6ZV89 423 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 HOXD1Q9GZZ0 328 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 PCDHGB1Q9Y5G3 927 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 ENPP4Q9Y6X5 453 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 C17orf105B2RV13 164 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 RASAL1O95294 804 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 GABRG2P18507 467 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 SLC19A1P41440 591 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 NUDT6P53370 316 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 METAP1P53582 386 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.26□□□□□ -0.13
USP47-207ENST00000527733 DNM1P34Q6PK57 102 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 PPP1R3BQ86XI6 285 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 OR8J2Q8NGG1 315 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 TBC1D20Q96BZ9 403 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 FBXL20Q96IG2 436 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 CNDP2Q96KP4 475 aaKnown RBP14.26□□□□□ -0.13
USP47-207ENST00000527733 TSPAN11A1L157 253 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 DPPA5A6NC42 116 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 AKAP8O43823 692 aaKnown RBP14.26□□□□□ -0.13
USP47-207ENST00000527733 C8BP07358 591 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 ZSWIM7Q19AV6 140 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 CYHR1Q6ZMK1 362 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 ANKFN1Q8N957 763 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 HS6ST2Q96MM7 605 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 C1QTNF3Q9BXJ4 246 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 KAT8Q9H7Z6 458 aaKnown RBP14.26□□□□□ -0.13
USP47-207ENST00000527733 CKLFQ9UBR5 152 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 DAPK2Q9UIK4 370 aa14.26□□□□□ -0.13
USP47-207ENST00000527733 ZNF99A8MXY4 864 aaPredicted RBP14.25□□□□□ -0.13
USP47-207ENST00000527733 H0YAE9 185 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 GINS1Q14691 196 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 PON3Q15166 354 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 RSBN1Q5VWQ0 802 aaPredicted RBP14.25□□□□□ -0.13
USP47-207ENST00000527733 AGBL5Q8NDL9 886 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 LINC00615Q96LM1 132 aaPredicted RBP14.25□□□□□ -0.13
USP47-207ENST00000527733 TEX101Q9BY14 249 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 SEMA6CQ9H3T2 930 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 CUTCQ9NTM9 273 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 PPM1BO75688 479 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 SNAP29O95721 258 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 NR2C1P13056 603 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 PGCP20142 388 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 SLC6A12P48065 614 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 GPR143P51810 404 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 HBA1P69905 142 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 C6orf132Q5T0Z8 1188 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 ZBTB46Q86UZ6 589 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 KBTBD2Q8IY47 623 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 TP53INP1Q96A56 240 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 CCDC115Q96NT0 180 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 ELL3Q9HB65 397 aaPredicted RBP14.25□□□□□ -0.13
USP47-207ENST00000527733 TNFRSF10DQ9UBN6 386 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 BLACEA4D250 179 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 AIFM1O95831 613 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 CD160O95971 181 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 CDH11P55287 796 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 SELENOWP63302 87 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 CD47Q08722 323 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 C14orf28Q4W4Y0 310 aa14.25□□□□□ -0.13
USP47-207ENST00000527733 TPRG1LQ5T0D9 272 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms