RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 OR6C68A6NDL8 312 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ANXA2P2A6NMY6 339 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TMEM233B4DJY2 109 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 E9PQ18 207 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 NPIPB9F8W1W9 429 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 BLOC1S5-TXNDC5H3BN57 136 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 M0QZ92 97 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ITGB1BP1O14713 200 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SMAD6O43541 496 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 FADS1O60427 444 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SLC19A2O60779 497 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PRAF2O60831 178 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ITGA10O75578 1167 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SLC22A3O75751 556 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 CBR3O75828 277 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ENDOD1O94919 500 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 OR4F21O95013 312 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 STBD1O95210 358 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 C22orf31O95567 290 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 LY86O95711 162 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 CXCL14O95715 111 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 LATS1O95835 1130 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 MOCS2O96007 188 aaPredicted RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 OPN1LWP04000 364 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SBK3P0C264 359 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 UBBP0CG47 229 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 UBCP0CG48 685 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 NR2C1P13056 603 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 NPR2P20594 1047 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 FPR1P21462 350 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 UQCRC2P22695 453 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PSMA1P25786 263 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 GPR3P46089 330 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 LHX1P48742 406 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PXNP49023 591 aaPredicted RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 CSNK1EP49674 416 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 GATMP50440 423 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 CASP9P55211 416 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 OR4D2P58180 307 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 RPL7AP62424 266 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 RPS27AP62979 156 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 UBA52P62987 128 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 CYP24A1Q07973 514 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 FABP9Q0Z7S8 132 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PDZK1IP1Q13113 114 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ZNF177Q13360 481 aaPredicted RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 PICALMQ13492 652 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 GRM3Q14832 879 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ARHGAP19Q14CB8 494 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PEA15Q15121 130 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PGM5Q15124 567 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 DHCR24Q15392 516 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 INO80DQ53TQ3 878 aaPredicted RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 RNASE10Q5GAN6 216 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 RABL3Q5HYI8 236 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 C3orf38Q5JPI3 329 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ODR4Q5SWX8 454 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 RIPPLY2Q5TAB7 128 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ARHGAP40Q5TG30 622 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 STRIP1Q5VSL9 837 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TXNRD3NBQ6F5E7 133 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 OR4F3Q6IEY1 312 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 CDPF1Q6NVV7 123 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 MSANTD2Q6P1R3 559 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 BAIAP2L2Q6UXY1 529 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TMEM179Q6ZVK1 233 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 KANSL1Q7Z3B3 1105 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TSPAN33Q86UF1 283 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 GLCCI1Q86VQ1 547 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 DENND1CQ8IV53 801 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PUSL1Q8N0Z8 303 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 ZFP82Q8N141 532 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 PYROXD2Q8N2H3 581 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 RTL3Q8N8U3 475 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 RASGEF1AQ8N9B8 481 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ZNF383Q8NA42 475 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 C2CD4AQ8NCU7 369 aaPredicted RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 MCPH1Q8NEM0 835 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ATP6V1C2Q8NEY4 427 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 OR8J3Q8NGG0 315 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 OR2T35Q8NGX2 323 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 OR10J5Q8NHC4 309 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 THAP6Q8TBB0 222 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 DNAJB14Q8TBM8 379 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TRMT10AQ8TBZ6 339 aaKnown RBP5.52□□□□□ -1.53
CD44-225ENST00000527326 TMEM163Q8TC26 289 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 STK35Q8TDR2 534 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 GPBAR1Q8TDU6 330 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 RXFP4Q8TDU9 374 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 CA5BP1Q8WTZ4 195 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 RNF139Q8WU17 664 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 POF1BQ8WVV4 589 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 APH1BQ8WW43 257 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 MAFIPQ8WZ33 124 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 ROBO4Q8WZ75 1007 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 TM9SF4Q92544 642 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 GGHQ92820 318 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 DNASE1L2Q92874 299 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 OSTF1Q92882 214 aa5.52□□□□□ -1.53
CD44-225ENST00000527326 SLAMF9Q96A28 289 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms