RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 PDYNP01213 254 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 KRT6AP02538 564 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 KRT6BP04259 564 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 GSTA1P08263 222 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 CPMP14384 443 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 NAGAP17050 411 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 IMPDH1P20839 514 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 ACVR2AP27037 513 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 GCAP28676 217 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 PIGAP37287 484 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 KRT6CP48668 564 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 MAN2A2P49641 1150 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 TMED10P49755 219 aaKnown RBP12.33□□□□□ -0.44
CAPN1-207ENST00000527189 NRG3P56975 720 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 KCNJ2P63252 427 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 RPP38P78345 283 aaKnown RBP12.33□□□□□ -0.44
CAPN1-207ENST00000527189 GALNT1Q10472 559 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-207ENST00000527189 PMPCAQ10713 525 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 MAP4K2Q12851 820 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 RASA2Q15283 850 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 SGO1Q5FBB7 561 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 ZNF678Q5SXM1 525 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 TEX35Q5T0J7 233 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 SLC48A1Q6P1K1 146 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 COMMD6Q7Z4G1 85 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 LRRC25Q8N386 305 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-207ENST00000527189 MARVELD2Q8N4S9 558 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 ZNF615Q8N8J6 731 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 FAM13CQ8NE31 585 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 OR10G3Q8NGC4 313 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 UCN3Q969E3 161 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 TM4SF18Q96CE8 201 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 TREX2Q9BQ50 279 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-207ENST00000527189 FAIM2Q9BWQ8 316 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 TRIM8Q9BZR9 551 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 OR10A5Q9H207 317 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 LDAHQ9H6V9 325 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 PROK2Q9HC23 129 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 TMEM216Q9P0N5 145 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 VPS29Q9UBQ0 182 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 ZNF225Q9UK10 706 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 NPFFR2Q9Y5X5 522 aa12.33□□□□□ -0.44
CAPN1-207ENST00000527189 CACNA1CQ13936 2221 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 TRGV5A0A0B4J1U4 118 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 A0A1B0GTL3 188 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 CCDC151A5D8V7 595 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 FAM47E-STBD1D6RA91 191 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 CDH16O75309 829 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 SUPT7LO94864 414 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 SNX4O95219 450 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 ATP1B1P05026 303 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 GABRA1P14867 456 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 CSNK2A2P19784 350 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 S1PR1P21453 382 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 ATP5F1P24539 256 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 SSTR4P31391 388 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 NR0B1P51843 470 aaKnown RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 PRKAA2P54646 552 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 NAA20P61599 178 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 CSTF3Q12996 717 aaKnown RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 UNC50Q53HI1 259 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 WLSQ5T9L3 541 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 TMEM198Q66K66 360 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 ZNF295-AS1Q8N0V1 137 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 GBP7Q8N8V2 638 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 EIF1ADQ8N9N8 165 aaKnown RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 OR5M3Q8NGP4 307 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 CHTF18Q8WVB6 975 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 ADIPOR1Q96A54 375 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 ZNF382Q96SR6 550 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 DOHHQ9BU89 302 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 ZNF703Q9H7S9 590 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 KCNJ16Q9NPI9 418 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 FARSBQ9NSD9 589 aaKnown RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 PNPLA3Q9NST1 481 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 B4GALT7Q9UBV7 327 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 DCDC2Q9UHG0 476 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 ACAD8Q9UKU7 415 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 CNOT11Q9UKZ1 510 aaKnown RBP12.32□□□□□ -0.44
CAPN1-207ENST00000527189 RNF6Q9Y252 685 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 EML6Q6ZMW3 1958 aa12.32□□□□□ -0.44
CAPN1-207ENST00000527189 SPG11Q96JI7 2443 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 FOXO6A8MYZ6 492 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 DLX3O60479 287 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 TRIM3O75382 744 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-207ENST00000527189 ULK1O75385 1050 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 ERLIN1O75477 346 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 OR4F21O95013 312 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 SNRPB2P08579 225 aaKnown RBP12.31□□□□□ -0.44
CAPN1-207ENST00000527189 CT62P0C5K7 136 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 DRD2P14416 443 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 CAPN3P20807 821 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 NT5EP21589 574 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 PKNOX1P55347 436 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 NUP107P57740 925 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 SLC29A2Q14542 456 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 RPS6KA2Q15349 733 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 PRICKLE4Q2TBC4 344 aa12.31□□□□□ -0.44
CAPN1-207ENST00000527189 PRAMEF20Q5VT98 475 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms