RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 FAM9CQ8IZT9 166 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 GOLM1Q8NBJ4 401 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 POGLUT1Q8NBL1 392 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 C17orf47Q8NEP4 570 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.33□□□□□ -0.28
NXF1-204ENST00000527064 ZNF675Q8TD23 568 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 DOK4Q8TEW6 326 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 BBS4Q96RK4 519 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 HES7Q9BYE0 225 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 MAT2BQ9NZL9 334 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 PRODH2Q9UF12 536 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.33□□□□□ -0.28
NXF1-204ENST00000527064 RAP2CQ9Y3L5 183 aa13.33□□□□□ -0.28
NXF1-204ENST00000527064 UBR5O95071 2799 aaPredicted RBP13.33□□□□□ -0.28
NXF1-204ENST00000527064 HELZ2Q9BYK8 2649 aaKnown RBP13.32□□□□□ -0.28
NXF1-204ENST00000527064 CAPN14A8MX76 684 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 SKAP2O75563 359 aaPredicted RBP13.32□□□□□ -0.28
NXF1-204ENST00000527064 LYPLA1O75608 230 aaPredicted RBP13.32□□□□□ -0.28
NXF1-204ENST00000527064 CBX6O95503 412 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 ASMTP46597 345 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 UQCRFS1P47985 274 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 TMED10P49755 219 aaKnown RBP13.32□□□□□ -0.28
NXF1-204ENST00000527064 NRG3P56975 720 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 PMP22Q01453 160 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 STX3Q13277 289 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 ZNF324BQ6AW86 544 aaPredicted RBP13.32□□□□□ -0.28
NXF1-204ENST00000527064 HDXQ7Z353 690 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 TRIM42Q8IWZ5 723 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 CCDC116Q8IYX3 515 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 ZNF615Q8N8J6 731 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 PSD4Q8NDX1 1056 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 RAB3IL1Q8TBN0 382 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 TP53INP1Q96A56 240 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 CTHRC1Q96CG8 243 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 SPACA9Q96E40 222 aaPredicted RBP13.32□□□□□ -0.28
NXF1-204ENST00000527064 ZNF764Q96H86 408 aaPredicted RBP13.32□□□□□ -0.28
NXF1-204ENST00000527064 FRMD6Q96NE9 622 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 TAS2R7Q9NYW3 318 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
NXF1-204ENST00000527064 SHANK1Q9Y566 2161 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 ITM2AO43736 263 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 ZNF24P17028 368 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 SDC1P18827 310 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 MEOX1P50221 254 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 RPL14P50914 215 aaKnown RBP13.31□□□□□ -0.28
NXF1-204ENST00000527064 TDGF1P3P51864 188 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 NCBP2P52298 156 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■□□□□ 10.8
NXF1-204ENST00000527064 ALDH6A1Q02252 535 aaKnown RBP13.31□□□□□ -0.28
NXF1-204ENST00000527064 DUSP2Q05923 314 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 MGAT2Q10469 447 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 MAD2L1Q13257 205 aaPredicted RBP13.31□□□□□ -0.28
NXF1-204ENST00000527064 MRPL49Q13405 166 aaKnown RBP13.31□□□□□ -0.28
NXF1-204ENST00000527064 RFTN2Q52LD8 501 aaPredicted RBP13.31□□□□□ -0.28
NXF1-204ENST00000527064 ZNF628Q5EBL2 1059 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 FAM180BQ6P0A1 224 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.31□□□□□ -0.28
NXF1-204ENST00000527064 ZNF781Q8N8C0 355 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 ZNF441Q8N8Z8 693 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 ADCY4Q8NFM4 1077 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 OR9A2Q8NGT5 310 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 C16orf52Q8NHV5 167 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 MGARPQ8TDB4 240 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 VIPAS39Q9H9C1 493 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 ZNF639Q9UID6 485 aa13.31□□□□□ -0.28
NXF1-204ENST00000527064 CNTRLQ7Z7A1 2325 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 MYO1GB0I1T2 1018 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 PEX1O43933 1283 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 PEX11AO75192 247 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 CBX7O95931 251 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 P04436 131 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 FBXO45P0C2W1 286 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 H2AFXP16104 143 aaPredicted RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 PCSK2P16519 638 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 S1PR1P21453 382 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 GPX3P22352 226 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 TACR1P25103 407 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 HPCAL1P37235 193 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 RPL3P39023 403 aaKnown RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 NR0B1P51843 470 aaKnown RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 WDR4P57081 412 aaKnown RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 DCAF7P61962 342 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 PSPHP78330 225 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 BST1Q10588 318 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 EXOSC7Q15024 291 aaKnown RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 LTB4RQ15722 352 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 PDCD2Q16342 344 aaPredicted RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 FHL5Q5TD97 284 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 CES4AQ5XG92 561 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 ATG16L1Q676U5 607 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 FAM111BQ6SJ93 734 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 MDGA2Q7Z553 956 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 R3HCC1LQ7Z5L2 792 aaKnown RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 SULF2Q8IWU5 870 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 FAM26EQ8N5C1 309 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 CPSF7Q8N684 471 aaKnown RBP13.3□□□□□ -0.28
NXF1-204ENST00000527064 FNDC5Q8NAU1 212 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 OR52R1Q8NGF1 315 aa13.3□□□□□ -0.28
NXF1-204ENST00000527064 PPCDCQ96CD2 204 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms