RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ZNF766Q5HY98 468 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 C6orf136Q5SQH8 315 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 ATG16L1Q676U5 607 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 C18orf63Q68DL7 685 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 CGB2Q6NT52 195 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 SHISA6Q6ZSJ9 500 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 COMMD6Q7Z4G1 85 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 CLNKQ7Z7G1 428 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 TRIM42Q8IWZ5 723 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 SRFBP1Q8NEF9 429 aaKnown RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 PPP1R14CQ8TAE6 165 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 ANKRD9Q96BM1 317 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 MAELQ96JY0 434 aaKnown RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 EGLN2Q96KS0 407 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 CRB3Q9BUF7 120 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 CCDC134Q9H6E4 229 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 MEAF6Q9HAF1 191 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 KCNK13Q9HB14 408 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 LYRM4Q9HD34 91 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 MKKSQ9NPJ1 570 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 HEY2Q9UBP5 337 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 ZNF282Q9UDV7 671 aaPredicted RBP10.15□□□□□ -0.78
NEDD8-204ENST00000526430 CES1P1Q9UKY3 287 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 DLGAP4Q9Y2H0 992 aa10.15□□□□□ -0.78
NEDD8-204ENST00000526430 IGKV3D-11A0A0A0MRZ8 115 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 A0A1W2PS29 197 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 IDSB3KWA1 339 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 PGRMC2O15173 223 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 ASNA1O43681 348 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 B3GALT2O43825 422 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 EDF1O60869 148 aaKnown RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 SKAP2O75563 359 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 RSL1D1O76021 490 aaKnown RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 LY6G6DO95868 133 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 FAM58BPP0C7Q3 252 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 NEFHP12036 1026 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 ALOX15P16050 662 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 MDH1P40925 334 aaKnown RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 RAB38P57729 211 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 PHEXP78562 749 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 DEFB113Q30KQ7 82 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 HSP90B2PQ58FF3 399 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 ABHD17BQ5VST6 288 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 TMEM205Q6UW68 189 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 PAMR1Q6UXH9 720 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 C3P1Q6ZMU1 363 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 LARP4Q71RC2 724 aaKnown RBP eCLIP10.14□□□□□ -0.793e-13■■■■■ 29.6
NEDD8-204ENST00000526430 SCUBE1Q8IWY4 988 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 PRSS58Q8IYP2 241 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 CPSF7Q8N684 471 aaKnown RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 PIWIL2Q8TC59 973 aaKnown RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 SREK1Q8WXA9 508 aaKnown RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 TBC1D20Q96BZ9 403 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 FRMD6Q96NE9 622 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF317Q96PQ6 595 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 NUF2Q9BZD4 464 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 VN1R1Q9GZP7 353 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 CLEC4MQ9H2X3 399 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 WDR55Q9H6Y2 383 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 AKTIPQ9H8T0 292 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 NECTIN3Q9NQS3 549 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 RASSF1Q9NS23 344 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 TEX10Q9NXF1 929 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 MARCOQ9UEW3 520 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-204ENST00000526430 MCM8Q9UJA3 840 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 ADAM21Q9UKJ8 722 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 FBXW2Q9UKT8 454 aa10.14□□□□□ -0.79
NEDD8-204ENST00000526430 NPIPA5E9PKD4 350 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 B4GALT2O60909 372 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 PEX11AO75192 247 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 FHP07954 510 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 KITP10721 976 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 IL10P22301 178 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 PCSK6P29122 969 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 TIA1P31483 386 aaKnown RBP eCLIP10.13□□□□□ -0.79
NEDD8-204ENST00000526430 SSR2P43308 183 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 RAP1GDS1P52306 607 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 IGLV3-21P80748 117 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-204ENST00000526430 PDCD2Q16342 344 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-204ENST00000526430 SLC9B1Q4ZJI4 515 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 TMEM211Q6ICI0 200 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 NIPAL1Q6NVV3 410 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 NOXRED1Q6NXP6 359 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 EPGNQ6UW88 154 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 FAM47EQ6ZV65 393 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 GPR180Q86V85 440 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 NUDT13Q86X67 352 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 MARVELD2Q8N4S9 558 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 ARFGAP2Q8N6H7 521 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 MDS2Q8NDY4 140 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 LRRC8CQ8TDW0 803 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 C16orf78Q8WTQ4 265 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 TSLPQ969D9 159 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 MIEF2Q96C03 454 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 C8orf44Q96CB5 159 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 FAR2Q96K12 515 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 PPP1R36Q96LQ0 422 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 OR1F2PQ96R84 312 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms