RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 M6PRP20645 277 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 EDNRAP25101 427 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 CRABP2P29373 138 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 CCR1P32246 355 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 HTR2BP41595 481 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 PTGER3P43115 390 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 DHPSP49366 369 aaPredicted RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 RAB28P51157 221 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 CARD18P57730 90 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 UBE2IP63279 158 aaKnown RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 S100A12P80511 92 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 DHODHQ02127 395 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 LIPEQ05469 1076 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 GFPT1Q06210 699 aaPredicted RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 ZFP36L1Q07352 338 aaKnown RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 SPAG1Q07617 926 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 AIMP1Q12904 312 aaKnown RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 ZNF177Q13360 481 aaPredicted RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 CASP8Q14790 479 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 DPYSL2Q16555 572 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 C1orf185Q5T7R7 199 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 ZNF658Q5TYW1 1059 aaPredicted RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 KRT74Q7RTS7 529 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 ASPGQ86U10 573 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 COMTD1Q86VU5 262 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 RYBPQ8N488 228 aaPredicted RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 OR56B2PQ8NGI1 322 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 DDI1Q8WTU0 396 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 TUBGCP3Q96CW5 907 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 C19orf60Q96EN9 201 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 ZNF560Q96MR9 790 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 ZNF558Q96NG5 402 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 NEDD4LQ96PU5 975 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 BTBD9Q96Q07 612 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 TESK2Q96S53 571 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 COQ7Q99807 217 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 TRIM62Q9BVG3 475 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 CARD6Q9BX69 1037 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 PINK1Q9BXM7 581 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 SHCBP1LQ9BZQ2 653 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 NDEL1Q9GZM8 345 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 XKR8Q9H6D3 395 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 LRRC19Q9H756 370 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 TMEM206Q9H813 350 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 RPRD1BQ9NQG5 326 aaKnown RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 PFDN4Q9NQP4 134 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 PHPT1Q9NRX4 125 aaPredicted RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 NRBP2Q9NSY0 501 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 TBC1D13Q9NVG8 400 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 NMRK1Q9NWW6 199 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 RHBDL2Q9NX52 303 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 HACD3Q9P035 362 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 NDUFA13Q9P0J0 144 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 HMG20BQ9P0W2 317 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 C5AR2Q9P296 337 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 USP16Q9Y5T5 823 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 AP1M2Q9Y6Q5 423 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 POLR1AO95602 1720 aaPredicted RBP3.18□□□□□ -1.9
CD44-217ENST00000525348 ACEP12821 1306 aa3.18□□□□□ -1.9
CD44-217ENST00000525348 STRCP1A6NGW2 1772 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 CLTCQ00610 1675 aaKnown RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 CFAP74Q9C0B2 1584 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 LOC100653049A0A140TA62 436 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ARHGEF37A1IGU5 675 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 LRRIQ4A6NIV6 560 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 SHISA9B4DS77 424 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 SPECC1L-ADORA2AF8WAN1 911 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 RAD51BO15315 384 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 KERAO60938 352 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 LRCH4O75427 683 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 CBR3O75828 277 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 FLOT1O75955 427 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 KRT34O76011 436 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TFPTP0C1Z6 253 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ANXA8P13928 327 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ANPEPP15144 967 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 EZRP15311 586 aaKnown RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 ATF6P18850 670 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ITIH1P19827 911 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 EEF1B2P24534 225 aaKnown RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 TAGLN2P37802 199 aaKnown RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 SLC12A3P55017 1021 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ACTN3Q08043 901 aaPredicted RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 ILF2Q12905 390 aaKnown RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 COTL1Q14019 142 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 DMC1Q14565 340 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 LASP1Q14847 261 aaKnown RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 KYAT1Q16773 422 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 HADHQ16836 314 aaKnown RBP3.17□□□□□ -1.9
CD44-217ENST00000525348 TMEM266Q2M3C6 531 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 SLC25A30Q5SVS4 291 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ANXA8L1Q5VT79 327 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 METTL21CQ5VZV1 264 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 SPECC1LQ69YQ0 1117 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 C3P1Q6ZMU1 363 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 CCDC50Q8IVM0 306 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 TCEANCQ8N8B7 351 aa3.17□□□□□ -1.9
CD44-217ENST00000525348 ZNF321PQ8N8H1 164 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms