RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 OR51Q1Q8NH59 317 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 SETD7Q8WTS6 366 aaKnown RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 THAP3Q8WTV1 239 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 MSI2Q96DH6 328 aaKnown RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 SNX18Q96RF0 628 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 EBF1Q9UH73 591 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 GAAP10253 952 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 RPS27LQ71UM5 84 aaKnown RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 AVL9Q8NBF6 648 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 DPEP3Q9H4B8 488 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 IL36AQ9UHA7 158 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 SALL3Q9BXA9 1300 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 LRRTM2O43300 516 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 CDC123O75794 336 aaPredicted RBP13.1□□□□□ -0.31
LRRK1-202ENST00000525284 NPRL2Q8WTW4 380 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 MGLLQ99685 303 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 SLC38A1Q9H2H9 487 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 POM121CA8CG34 1229 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ATP6V1G2-DDX39BF2Z307 99 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 PRKYO43930 277 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 PROS1P07225 676 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 LIPCP11150 499 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ABHD18Q0P651 414 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 YIF1BQ5BJH7 314 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 KIAA1211LQ6NV74 962 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 NLGN4XQ8N0W4 816 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF610Q8N9Z0 462 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 NCDNQ9UBB6 729 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 RNF11Q9Y3C5 154 aa13.1□□□□□ -0.31
LRRK1-202ENST00000525284 MEIS3P1A6NDR6 274 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 CD6P30203 668 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 CSKP41240 450 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 BMXP51813 675 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 SP3Q02447 781 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 SLC22A10Q63ZE4 541 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 KIAA0930Q6ICG6 404 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 TMEM150AQ86TG1 271 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 SLC35F5Q8WV83 523 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 FAM122AQ96E09 287 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF436Q9C0F3 470 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ZDHHC3Q9NYG2 299 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ARVCFO00192 962 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 BEST1O76090 585 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 OR12D1P0DN82 309 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 NDUFS1P28331 727 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 KCNAB2Q13303 367 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 GDF6Q6KF10 455 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 FAM111BQ6SJ93 734 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 GTF2H5Q6ZYL4 71 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 RDH10Q8IZV5 341 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 OR4K1Q8NGD4 311 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 OR1J4Q8NGS1 313 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 FAM120CQ9NX05 1096 aaKnown RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 KLHL13Q9P2N7 655 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 C19orf25Q9UFG5 118 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 FZD10Q9ULW2 581 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ADGRB2O60241 1585 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 PRPH2P23942 346 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 HTR7P34969 479 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 RPL23AP62750 156 aaKnown RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 C2orf27AQ580R0 203 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 BEX5Q5H9J7 111 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF486Q96H40 463 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ACBD6Q9BR61 282 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 TSPAN11A1L157 253 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 KITLGP21583 273 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 L1CAMP32004 1257 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 GABRA3P34903 492 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ACTA2P62736 377 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ACTG2P63267 376 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 HEPHL1Q6MZM0 1159 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 TMEM126BQ8IUX1 230 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ZFAND2BQ8WV99 257 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 CNTNAP3Q9BZ76 1288 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 IL1AP01583 271 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 ARL16Q0P5N6 197 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
LRRK1-202ENST00000525284 IRGQQ8WZA9 623 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 DNAJC19Q96DA6 116 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
LRRK1-202ENST00000525284 SSTR2P30874 369 aa13.08□□□□□ -0.31
LRRK1-202ENST00000525284 KCNC1P48547 511 aa13.08□□□□□ -0.31
LRRK1-202ENST00000525284 SPHARQ15513 63 aa13.08□□□□□ -0.31
LRRK1-202ENST00000525284 DPPA2Q7Z7J5 298 aa13.08□□□□□ -0.31
LRRK1-202ENST00000525284 LRRC46Q96FV0 321 aa13.08□□□□□ -0.31
LRRK1-202ENST00000525284 B3GNT3Q9Y2A9 372 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms