RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CDSNQ15517 529 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 FBXW8Q8N3Y1 598 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 GBP7Q8N8V2 638 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-203ENST00000525013 CHTF18Q8WVB6 975 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 CCDC126Q96EE4 140 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 JSRP1Q96MG2 331 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-203ENST00000525013 SMC6Q96SB8 1091 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 TP63Q9H3D4 680 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-203ENST00000525013 LDAHQ9H6V9 325 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 SH2D2AQ9NP31 389 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 BCAP29Q9UHQ4 241 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 EMCNQ9ULC0 261 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 BOKQ9UMX3 212 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-203ENST00000525013 TIMM22Q9Y584 194 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 HRH3Q9Y5N1 445 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 LIPGQ9Y5X9 500 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 ZNF780BQ9Y6R6 833 aa17.09■□□□□ 0.33
CAPN1-203ENST00000525013 INTS1Q8N201 2190 aaKnown RBP17.08■□□□□ 0.33
CAPN1-203ENST00000525013 EXPH5Q8NEV8 1989 aa17.08■□□□□ 0.33
CAPN1-203ENST00000525013 GNG14A0A1W2PPG7 69 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 TP53I11O14683 189 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 CELA3AP09093 270 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 CCT5P48643 541 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 HTR6P50406 440 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 NRG3P56975 720 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 TRA2BP62995 288 aaKnown RBP17.08■□□□□ 0.32
CAPN1-203ENST00000525013 HMGCS1Q01581 520 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 BTKQ06187 659 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 TMEM211Q6ICI0 200 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 FAM180BQ6P0A1 224 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 FAM111BQ6SJ93 734 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 SCIMPQ6UWF3 145 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 ZYG11AQ6WRX3 759 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 VWA5B2Q8N398 1253 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 ZNF615Q8N8J6 731 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 ADCY4Q8NFM4 1077 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 OR7G1Q8NGA0 311 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 OR5M9Q8NGP3 310 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 DIO2Q92813 273 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 TP53INP1Q96A56 240 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 SDCCAG3Q96C92 435 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 KCNA7Q96RP8 456 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 ACPTQ9BZG2 426 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 GSTO2Q9H4Y5 243 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 EXO5Q9H790 373 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 L2HGDHQ9H9P8 463 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 MID1IP1Q9NPA3 183 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 PFDN4Q9NQP4 134 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 RYDENQ9NUL5 291 aaKnown RBP17.08■□□□□ 0.32
CAPN1-203ENST00000525013 COQ3Q9NZJ6 369 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 MCM8Q9UJA3 840 aa17.08■□□□□ 0.32
CAPN1-203ENST00000525013 CHCHD2Q9Y6H1 151 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-203ENST00000525013 G3V2L1 256 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 PCDH7O60245 1069 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 COX6B1P14854 86 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 MAN2A2P49641 1150 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 FBXW4P57775 412 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 ACSM2AQ08AH3 577 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 EXOSC7Q15024 291 aaKnown RBP17.07■□□□□ 0.32
CAPN1-203ENST00000525013 NTRK2Q16620 822 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 HYAL4Q2M3T9 481 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 GXYLT1Q4G148 440 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 EMC4Q5J8M3 183 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 CFAP157Q5JU67 520 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 ACSM2BQ68CK6 577 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 TRILQ7L0X0 811 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 MCEMP1Q8IX19 187 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 ZNF441Q8N8Z8 693 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 CCDC63Q8NA47 563 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 EPS8L3Q8TE67 593 aaKnown RBP17.07■□□□□ 0.32
CAPN1-203ENST00000525013 CA5BP1Q8WTZ4 195 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 DOHHQ9BU89 302 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 PPCSQ9HAB8 311 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 ZFP64Q9NPA5 681 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 TNFRSF10DQ9UBN6 386 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 HEY2Q9UBP5 337 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 ACAD8Q9UKU7 415 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 GRID1Q9ULK0 1009 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 DLGAP4Q9Y2H0 992 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 NPFFR2Q9Y5X5 522 aa17.07■□□□□ 0.32
CAPN1-203ENST00000525013 OR14I1A6ND48 311 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 CRCPO75575 148 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 IGHG3P01860 377 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 PROCP04070 461 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 ATP1B1P05026 303 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 IL3P08700 152 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 PRF1P14222 555 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 S1PR1P21453 382 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 TNFRSF8P28908 595 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 TMED10P49755 219 aaKnown RBP17.06■□□□□ 0.32
CAPN1-203ENST00000525013 NAGLUP54802 743 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 MAP4K2Q12851 820 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 RPS6KA2Q15349 733 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 PRICKLE4Q2TBC4 344 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 CCDC153Q494R4 210 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 SPIN4Q56A73 249 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 SPDYAQ5MJ70 313 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 ZNF585AQ6P3V2 769 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 SH2D5Q6ZV89 423 aa17.06■□□□□ 0.32
CAPN1-203ENST00000525013 TDRPQ86YL5 185 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms