RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TRIM77I1YAP6 450 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 HCRTR1O43613 425 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 GRAP2O75791 330 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 IGHV4-31P0DP07 118 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 FCGR2AP12318 317 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 CEACAM8P31997 349 aaPredicted RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 GJC1P36383 396 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 SKIV2L2P42285 1042 aaKnown RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 MTNR1AP48039 350 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 RPS4XP62701 263 aaKnown RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 HNRNPA0Q13151 305 aaKnown RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 PARP15Q460N3 678 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 LRRC66Q68CR7 880 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 RWDD4Q6NW29 188 aaKnown RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 AADACL2Q6P093 401 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 GJB7Q6PEY0 223 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 TMEM270Q6UE05 265 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 INTS8Q75QN2 995 aaKnown RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 H1FNTQ75WM6 255 aaPredicted RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 ABHD13Q7L211 337 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 PCGF5Q86SE9 256 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 CRLF3Q8IUI8 442 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 PAQR4Q8N4S7 273 aaPredicted RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 NT5C3BQ969T7 300 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 EPSTI1Q96J88 318 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 DEFB127Q9H1M4 99 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 KIR3DX1Q9H7L2 352 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 PDFQ9HBH1 243 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF282Q9UDV7 671 aaPredicted RBP6.29□□□□□ -1.4
NEDD8-203ENST00000524927 STAP1Q9ULZ2 295 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 FRMD4BQ9Y2L6 1034 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
NEDD8-203ENST00000524927 HEATR5AQ86XA9 2040 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 A0A087X0M5 115 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 A0A1B0GX30 115 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 TMEM247A6NEH6 219 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 CXorf65A6NEN9 183 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 LRRC3CA6NJW4 275 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 TEX22C9J3V5 150 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 OR10H2O60403 315 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 CHRM4P08173 479 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 TBXAS1P24557 533 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 RFC3P40938 356 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 CLK3P49761 638 aaKnown RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 STC1P52823 247 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 EMP2P54851 167 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ELLP55199 621 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 RHAGQ02094 409 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 SLC18A3Q16572 532 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 DEFB110Q30KQ9 67 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF813Q6ZN06 617 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 CPLX4Q7Z7G2 160 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF547Q8IVP9 402 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 TMEM217Q8N7C4 229 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF611Q8N823 705 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 SCAIQ8N9R8 606 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 BOLLQ8N9W6 283 aaKnown RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 OR4E2Q8NGC2 313 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 NFKBIDQ8NI38 313 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 RAB40AQ8WXH6 277 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 HSPH1Q92598 858 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 QRFPRQ96P65 431 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 IFT27Q9BW83 186 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 PRDM13Q9H4Q3 707 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ASB8Q9H765 288 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 TRIM45Q9H8W5 580 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 Q9N2J8 555 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 IMP3Q9NV31 184 aaKnown RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF226Q9NYT6 803 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 HCN3Q9P1Z3 774 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 SLC25A10Q9UBX3 287 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-203ENST00000524927 OR12D3Q9UGF7 316 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 ACAD8Q9UKU7 415 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 PLCL2Q9UPR0 1127 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 PPIL1Q9Y3C6 166 aa6.28□□□□□ -1.4
NEDD8-203ENST00000524927 EML6Q6ZMW3 1958 aa6.27□□□□□ -1.4
NEDD8-203ENST00000524927 IGLV3-12A0A075B6K2 115 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 SLC22A23A1A5C7 686 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 DPPA5A6NC42 116 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 OR6C68A6NDL8 312 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 PROP1O75360 226 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 BMP15O95972 392 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 IGHG3P01860 377 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 NR3C1P04150 777 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 CRYGSP22914 178 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 OR1D4P47884 311 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 SULT1E1P49888 294 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 SLC12A2P55011 1212 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 XRCC4Q13426 336 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 SEMA3AQ14563 771 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 HENMT1Q5T8I9 393 aaKnown RBP6.27□□□□□ -1.41
NEDD8-203ENST00000524927 WLSQ5T9L3 541 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 CCDC73Q6ZRK6 1079 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 RGS9BPQ6ZS82 235 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 SLC26A9Q7LBE3 791 aa6.27□□□□□ -1.41
NEDD8-203ENST00000524927 PRSS58Q8IYP2 241 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms