RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 SPIN4Q56A73 249 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 ZNF628Q5EBL2 1059 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 CMPK2Q5EBM0 449 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 TNFAIP8L3Q5GJ75 292 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 SPDYAQ5MJ70 313 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 PRAMEF20Q5VT98 475 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 KANK2Q63ZY3 851 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 GALNT18Q6P9A2 607 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 SLC29A4Q7RTT9 530 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 EXOC3L1Q86VI1 746 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 CCDC116Q8IYX3 515 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 PRR22Q8IZ63 422 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 CNPY4Q8N129 248 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 ZFP62Q8NB50 900 aaPredicted RBP8.78□□□□□ -1
PABPC1-222ENST00000523555 FAM98AQ8NCA5 519 aaKnown RBP8.78□□□□□ -1
PABPC1-222ENST00000523555 OR2M7Q8NG81 312 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 OR10G3Q8NGC4 313 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 OR5L2Q8NGL0 311 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 OR5M3Q8NGP4 307 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 C16orf52Q8NHV5 167 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 CDC26Q8NHZ8 85 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.78□□□□□ -1
PABPC1-222ENST00000523555 AGR3Q8TD06 166 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 EXOSC8Q96B26 276 aaKnown RBP8.78□□□□□ -1
PABPC1-222ENST00000523555 ART5Q96L15 291 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 SMC6Q96SB8 1091 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 ITPAQ9BY32 194 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 IQCGQ9H095 443 aaKnown RBP8.78□□□□□ -1
PABPC1-222ENST00000523555 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
PABPC1-222ENST00000523555 TIMMDC1Q9NPL8 285 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 NMRK1Q9NWW6 199 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 TINAGQ9UJW2 476 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 UTS2RQ9UKP6 389 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 LIPGQ9Y5X9 500 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 DOPEY1Q5JWR5 2465 aa8.78□□□□□ -1
PABPC1-222ENST00000523555 PHF3Q92576 2039 aaKnown RBP8.78□□□□□ -1
PABPC1-222ENST00000523555 NUP214P35658 2090 aaPredicted RBP8.77□□□□□ -1
PABPC1-222ENST00000523555 ARHGAP21Q5T5U3 1957 aa8.77□□□□□ -1
PABPC1-222ENST00000523555 KIAA1549Q9HCM3 1950 aa8.77□□□□□ -1
PABPC1-222ENST00000523555 C2orf92A0A1B0GVN3 265 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 OR6C76A6NM76 312 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 AZIN1O14977 448 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 ITM2AO43736 263 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 DYRK3O43781 588 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 NPHS1O60500 1241 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 SLC19A2O60779 497 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CRCPO75575 148 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 LYPLA1O75608 230 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 RSL1D1O76021 490 aaKnown RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 PDE9AO76083 593 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 BPGMP07738 259 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CELA3AP09093 270 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 ANXA4P09525 319 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 FBXO45P0C2W1 286 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 LINC00032P0C843 101 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 GPX3P22352 226 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 DEKP35659 375 aaKnown RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CA7P43166 264 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 FBXW4P57775 412 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 ZNF763Q0D2J5 394 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 C2orf80Q0P641 193 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 FOXO1Q12778 655 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 MAP4K2Q12851 820 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 MPP2Q14168 576 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 IMPG1Q17R60 797 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 UGT3A2Q3SY77 523 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 ARL13AQ5H913 290 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CEP85LQ5SZL2 805 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 BICRALQ6AI39 1079 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 FAM71E1Q6IPT2 247 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 RTL4Q6ZR62 310 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 GPALPP1Q8IXQ4 340 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 LRRC25Q8N386 305 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 VWA5B2Q8N398 1253 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 OR52R1Q8NGF1 315 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 OR9A2Q8NGT5 310 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 OR6Y1Q8NGX8 325 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 KAT2AQ92830 837 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CTHRC1Q96CG8 243 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 SPACA9Q96E40 222 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 FAIM2Q9BWQ8 316 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 TTTY12Q9BZ98 90 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 NXF5Q9H1B4 397 aaKnown RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 DEFB127Q9H1M4 99 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 TUBA8Q9NY65 449 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 PLEKHB1Q9UF11 243 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 MID2Q9UJV3 735 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CNOT11Q9UKZ1 510 aaKnown RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 ZNF835Q9Y2P0 537 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 HRH3Q9Y5N1 445 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 DNAJC15Q9Y5T4 150 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CHCHD2Q9Y6H1 151 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-222ENST00000523555 MED12Q93074 2177 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CRYBG3Q68DQ2 2970 aa8.77□□□□□ -1.01
PABPC1-222ENST00000523555 CACNA1CQ13936 2221 aa8.76□□□□□ -1.01
PABPC1-222ENST00000523555 A0A1B0GTH9 108 aa8.76□□□□□ -1.01
PABPC1-222ENST00000523555 WDR91A4D1P6 747 aa8.76□□□□□ -1.01
PABPC1-222ENST00000523555 GOLGA6L10A6NI86 522 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms