RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ARMC5Q96C12 935 aa8.58□□□□□ -1.04
CSMD1-212ENST00000523387 GINS4Q9BRT9 223 aa8.58□□□□□ -1.04
CSMD1-212ENST00000523387 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
CSMD1-212ENST00000523387 P2RX2Q9UBL9 471 aa8.58□□□□□ -1.04
CSMD1-212ENST00000523387 DIMT1Q9UNQ2 313 aaKnown RBP8.58□□□□□ -1.04
CSMD1-212ENST00000523387 ASB4Q9Y574 426 aa8.58□□□□□ -1.04
CSMD1-212ENST00000523387 A0A0G2JMP0 313 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 A0A0X1KG70 313 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 PRODHO43272 600 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 PRKYO43930 277 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 STC2O76061 302 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 OAZ2O95190 189 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 PAHP00439 452 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 APOC3P02656 99 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 RB1P06400 928 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 GABRA5P31644 462 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 RFX3P48380 749 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 RGS8P57771 180 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SNRPGP62308 76 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 GRHL2Q6ISB3 625 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 MTFR2Q6P444 385 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SLC24A5Q71RS6 500 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 CFAP206Q8IYR0 622 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF683Q8IZ20 524 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF433Q8N7K0 673 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SLC43A3Q8NBI5 491 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 OR4M2Q8NGB6 313 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 TMEM163Q8TC26 289 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 UPF1Q92900 1129 aaKnown RBP eCLIP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZSWIM3Q96MP5 696 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 TMEM43Q9BTV4 400 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 OR51I1Q9H343 314 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 BRD7Q9NPI1 651 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 MRPL15Q9P015 296 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 NPIPB15A6NHN6 443 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 UNCXA6NJT0 531 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 CPSF4LA6NMK7 179 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 QSOX1O00391 747 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SMAD6O43541 496 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SLC16A8O95907 504 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 RAF1P04049 648 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 HRGP04196 525 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 MPC1LP0DKB6 136 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ARAFP10398 606 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 PITPNBP48739 271 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SGSHP51688 502 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 WNT3P56703 355 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 PITPNAQ00169 270 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 GPR176Q14439 515 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZMYND11Q15326 602 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 GRK1Q15835 563 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 NDUFAF6Q330K2 333 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 HSD17B12Q53GQ0 312 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SLC25A25Q6KCM7 469 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 FUT10Q6P4F1 479 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 TMEM220Q6QAJ8 160 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF782Q6ZMW2 699 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 DDX53Q86TM3 631 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 PGBD3Q8N328 593 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 DCAF4L2Q8NA75 395 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 OR2AP1Q8NGE2 309 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ADAMTS19Q8TE59 1207 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 C16orf78Q8WTQ4 265 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ACOT12Q8WYK0 555 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 UPRTQ96BW1 309 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 SUV39H2Q9H5I1 410 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF69Q9UC07 566 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 IL20RAQ9UHF4 553 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ASF1AQ9Y294 204 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ANK1P16157 1881 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 FXYD6-FXYD2A0A087WZ82 144 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 GABRPO00591 440 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF250P15622 560 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 POU3F3P20264 500 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 CFAP77Q6ZQR2 320 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 VRK3Q8IV63 474 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 CDK20Q8IZL9 346 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF614Q8N883 585 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 CHFRQ96EP1 664 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ELMOD3Q96FG2 381 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 WRAP53Q9BUR4 548 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ZCCHC2Q9C0B9 1178 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 FXYD6Q9H0Q3 95 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 MIXL1Q9H2W2 232 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 ELAC1Q9H777 363 aaKnown RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 KCNK12Q9HB15 430 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 GPN1Q9HCN4 374 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-212ENST00000523387 B4GALT6Q9UBX8 382 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 NEUROG3Q9Y4Z2 214 aa8.57□□□□□ -1.04
CSMD1-212ENST00000523387 A0A1B0GVI7 797 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 A0A1W2PPK0 400 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 SLC16A5O15375 505 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 FCER2P06734 321 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 OR12D1P0DN82 309 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 PTPN6P29350 595 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 STARP49675 285 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 PER3P56645 1201 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 RAB40BQ12829 278 aa8.56□□□□□ -1.04
CSMD1-212ENST00000523387 GPR17Q13304 367 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms