RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 TRRAPQ9Y4A5 3859 aa12.48□□□□□ -0.41
NKX3-1-202ENST00000523261 CADP27708 2225 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 OR6C76A6NM76 312 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 AP3B1O00203 1094 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 ABCB7O75027 752 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 CDH16O75309 829 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 HNF1AP20823 631 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 TMED10P49755 219 aaKnown RBP12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 DSCR9P59020 149 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 PLIN5Q00G26 463 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 DEFA6Q01524 100 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 SETDB1Q15047 1291 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 GUSBP1Q15486 140 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 NRF1Q16656 503 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 EXOC3L2Q2M3D2 409 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 FAM166AQ6J272 317 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 PAQR3Q6TCH7 311 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 CLEC2AQ6UVW9 174 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 DNAJC14Q6Y2X3 702 aaPredicted RBP12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF793Q6ZN11 406 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 BBOF1Q8ND07 529 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 FIG4Q92562 907 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 TP53INP1Q96A56 240 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 LINGO1Q96FE5 620 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 NTMT1Q9BV86 223 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 PHACTR1Q9C0D0 580 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 GRIP2Q9C0E4 1043 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 C12orf65Q9H3J6 166 aaKnown RBP12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 ACTR8Q9H981 624 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 PAK5Q9P286 719 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 SLC22A14Q9Y267 594 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF281Q9Y2X9 895 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 KCNE2Q9Y6J6 123 aa12.47□□□□□ -0.41
NKX3-1-202ENST00000523261 C2orf92A0A1B0GVN3 265 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 CLOCKO15516 846 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 LIASO43766 372 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 CBR3O75828 277 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 GUCA1CO95843 209 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 FTCDO95954 541 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 RHOXF2BP0C7M4 288 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 SLC25A16P16260 332 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 GSTM2P28161 218 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 PTGDSP41222 190 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 SLC1A2P43004 574 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 NUDT6P53370 316 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 SLBPQ14493 270 aaKnown RBP eCLIP12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 FGFBP1Q14512 234 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF267Q14586 743 aaPredicted RBP12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 CYP1B1Q16678 543 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 TMEM81Q6P7N7 255 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 AAGABQ6PD74 315 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 METTL7AQ9H8H3 244 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 RNF122Q9H9V4 155 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 TAS2R10Q9NYW0 307 aa12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 EXO1Q9UQ84 846 aaKnown RBP12.46□□□□□ -0.41
NKX3-1-202ENST00000523261 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 PABPN1LA6NDY0 278 aaKnown RBP12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ICOSLGO75144 302 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 HAUS5O94927 633 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ZSCAN5DPP0CG00 497 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 C1GALT1C1LP0DN25 315 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ALOX15P16050 662 aaPredicted RBP12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 HPDP32754 393 aaPredicted RBP12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 COMPP49747 757 aaPredicted RBP12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 GZMKP49863 264 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ZNF844Q08AG5 666 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 BIKQ13323 160 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 BCL2A1Q16548 175 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 NCMAPQ5T1S8 102 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 DESI1Q6ICB0 168 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ADNP2Q6IQ32 1131 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 SLC30A6Q6NXT4 461 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 SLCO4C1Q6ZQN7 724 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 CHMP1BQ7LBR1 199 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 UBE3DQ7Z6J8 389 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 DTX2Q86UW9 622 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 LUZP1Q86V48 1076 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 PRR22Q8IZ63 422 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ST13P4Q8IZP2 240 aaPredicted RBP12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 WDSUB1Q8N9V3 476 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 SFXN2Q96NB2 322 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 F2RL3Q96RI0 385 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 NDNQ99608 321 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 TRIM54Q9BYV2 358 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ACTR6Q9GZN1 396 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 ALG2Q9H553 416 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 MANSC1Q9H8J5 431 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 EML4Q9HC35 981 aaKnown RBP12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 GALNT9Q9HCQ5 603 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 B3GALT5Q9Y2C3 310 aa12.45□□□□□ -0.42
NKX3-1-202ENST00000523261 DLX3O60479 287 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 MFAP3LO75121 409 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 H2AFYO75367 372 aaKnown RBP12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 CD3EP07766 207 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 ABCB1P08183 1280 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms