RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 SERPINB3P29508 390 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 HTR6P50406 440 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 RAE1P78406 368 aaKnown RBP11.38□□□□□ -0.59
VEGFA-223ENST00000523125 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 DUSP8Q13202 625 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 SLC10A1Q14973 349 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 RASA2Q15283 850 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 PRICKLE4Q2TBC4 344 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 PRAMEF20Q5VT98 475 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 FAM111BQ6SJ93 734 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 GPRIN3Q6ZVF9 776 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 SRRM1Q8IYB3 904 aaKnown RBP11.38□□□□□ -0.59
VEGFA-223ENST00000523125 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 EID3Q8N140 333 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 LRRC25Q8N386 305 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-223ENST00000523125 SIMC1Q8NDZ2 872 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 OR5M3Q8NGP4 307 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 SDCCAG3Q96C92 435 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 NTNG2Q96CW9 530 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 C11orf24Q96F05 449 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-223ENST00000523125 ZNF681Q96N22 645 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 SMC6Q96SB8 1091 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 TRIM8Q9BZR9 551 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 OR10A5Q9H207 317 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 ZNF703Q9H7S9 590 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-223ENST00000523125 TNFRSF10DQ9UBN6 386 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 HEY2Q9UBP5 337 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 VPS29Q9UBQ0 182 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 ZNF639Q9UID6 485 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 DTX4Q9Y2E6 619 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 CSMD1Q96PZ7 3565 aa11.38□□□□□ -0.59
VEGFA-223ENST00000523125 ANKRD33BA6NCL7 494 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 G3V2L1 256 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 AQP7O14520 342 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 UBFD1O14562 309 aaKnown RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 GUCY1B2O75343 617 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 TRIM3O75382 744 aaPredicted RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 ULK1O75385 1050 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 KRT6AP02538 564 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 KRT6BP04259 564 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 ATP1B1P05026 303 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 ENDOUP21128 410 aaKnown RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 NT5EP21589 574 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 GPX3P22352 226 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 PTGER4P35408 488 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 FEN1P39748 380 aaKnown RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 KRT6CP48668 564 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 FBXW4P57775 412 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 TRA2BP62995 288 aaKnown RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 KCNJ2P63252 427 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 CSTF3Q12996 717 aaKnown RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 LCP2Q13094 533 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 BICRALQ6AI39 1079 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 RTL6Q6ICC9 239 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 TMEM211Q6ICI0 200 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 FAM180BQ6P0A1 224 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 SLC22A9Q8IVM8 553 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 TAGAPQ8N103 731 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 EIF1ADQ8N9N8 165 aaKnown RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 C17orf47Q8NEP4 570 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 ADCY4Q8NFM4 1077 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 OR7G1Q8NGA0 311 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 OR5M9Q8NGP3 310 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 METTL6Q8TCB7 284 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 CA5BP1Q8WTZ4 195 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 CTHRC1Q96CG8 243 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 CNRIP1Q96F85 164 aaPredicted RBP11.37□□□□□ -0.59
VEGFA-223ENST00000523125 KCNA7Q96RP8 456 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 ACPTQ9BZG2 426 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 ENKD1Q9H0I2 346 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 GSTO2Q9H4Y5 243 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 RUBCNLQ9H714 662 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 ZFP64Q9NPA5 681 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 NMRK1Q9NWW6 199 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 SPRR3Q9UBC9 169 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 DCDC2Q9UHG0 476 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 RNF6Q9Y252 685 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 NPFFR2Q9Y5X5 522 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 CELSR1Q9NYQ6 3014 aa11.37□□□□□ -0.59
VEGFA-223ENST00000523125 GOLGA6L10A6NI86 522 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 BCKDKO14874 412 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 HCN1O60741 890 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 ERAL1O75616 437 aaKnown RBP11.36□□□□□ -0.59
VEGFA-223ENST00000523125 ESRRBO95718 433 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 COX6B1P14854 86 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 CSNK2A2P19784 350 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-223ENST00000523125 ACVR2AP27037 513 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 MAN2A2P49641 1150 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 PKNOX1P55347 436 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 NUP107P57740 925 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 PMPCAQ10713 525 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 EXOSC7Q15024 291 aaKnown RBP11.36□□□□□ -0.59
VEGFA-223ENST00000523125 RPS6KA2Q15349 733 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 FNDC7Q5VTL7 733 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 VWA5B2Q8N398 1253 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 LILRB4Q8NHJ6 448 aa11.36□□□□□ -0.59
VEGFA-223ENST00000523125 SPPL2AQ8TCT8 520 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms