RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	RP9	Q8TA86	221 aa	Known RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	OR5P2	Q8WZ92	322 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	FER1L6-AS2	Q96M78	137 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	CCDC115	Q96NT0	180 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	INPP5K	Q9BT40	448 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	SLC25A23	Q9BV35	468 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	TRIM4	Q9C037	500 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	ADNP	Q9H2P0	1102 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	SERHL	Q9NQF3	203 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	BTNL2	Q9UIR0	455 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	FBXL4	Q9UKA2	621 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	HS3ST3B1	Q9Y662	390 aa		11.13	□□□□□ -0.63
PVT1-215	ENST00000522963	NUP210L	Q5VU65	1888 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	SPTA1	P02549	2419 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	LOC102723996	A0A087X1L8	192 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CCT8L1P	A6NM43	557 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	SOCS6	O14544	535 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CPSF4	O95639	269 aa	Known RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	ABCB1	P08183	1280 aa	Predicted RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CT62	P0C5K7	136 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	SFTPC	P11686	197 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	ITGA3	P26006	1051 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	GALNS	P34059	522 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CDKN2C	P42773	168 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	HBA1	P69905	142 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	MGAT2	Q10469	447 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	KRT72	Q14CN4	511 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	ELAVL1	Q15717	326 aa	Known RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	MAPKAPK3	Q16644	382 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	PRICKLE4	Q2TBC4	344 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	ZNF628	Q5EBL2	1059 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	COLEC12	Q5KU26	742 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	DCAF10	Q5QP82	559 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	REP15	Q6BDI9	236 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	FAM111B	Q6SJ93	734 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	KIRREL2	Q6UWL6	708 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	APLF	Q8IW19	511 aa	Predicted RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	AMER2	Q8N7J2	671 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CLEC1A	Q8NC01	280 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	C7orf57	Q8NEG2	295 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	VPS37A	Q8NEZ2	397 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	OR4A15	Q8NGL6	344 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	ZFP28	Q8NHY6	868 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	GTF2H4	Q92759	462 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	KAT2A	Q92830	837 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	RIT1	Q92963	219 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CMTM5	Q96DZ9	223 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	RBM18	Q96H35	190 aa	Known RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	VPS50	Q96JG6	964 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	NPAS2	Q99743	824 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	WDR77	Q9BQA1	342 aa	Predicted RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	PELO	Q9BRX2	385 aa	Known RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	SLC25A18	Q9H1K4	315 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CXorf36	Q9H7Y0	433 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	RMND5A	Q9H871	391 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CXorf21	Q9HAI6	301 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	ADAP2	Q9NPF8	381 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	ATP13A2	Q9NQ11	1180 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	MAT2B	Q9NZL9	334 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	LEF1	Q9UJU2	399 aa	Predicted RBP	11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	TP53TG5	Q9Y2B4	290 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	NDUFAF1	Q9Y375	327 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CNTRL	Q7Z7A1	2325 aa		11.12	□□□□□ -0.63
PVT1-215	ENST00000522963	CFAP47	Q6ZTR5	3102 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	SYNDIG1L	A6NDD5	238 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	BBIP1	A8MTZ0	92 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	C17orf105	B2RV13	164 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963		K7EM74	188 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	HRK	O00198	91 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	PCDH17	O14917	1159 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	ANGPT2	O15123	496 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	CBX6	O95503	412 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	TNNI3	P19429	210 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	S1PR1	P21453	382 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	GPC1	P35052	558 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	MC3R	P41968	323 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	CPA2	P48052	419 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	PGD	P52209	483 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	GABPB1	Q06547	395 aa	Predicted RBP	11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	LRRC74A	Q0VAA2	488 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	MAP4K2	Q12851	820 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	STX5	Q13190	355 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	PCOLCE	Q15113	449 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	SPRED3	Q2MJR0	410 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	GTDC1	Q4AE62	458 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	LACTB2	Q53H82	288 aa	Predicted RBP	11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	PAPD4	Q6PIY7	484 aa	Known RBP	11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	C6orf89	Q6UWU4	347 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	TMEM107	Q6UX40	140 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	GALNT12	Q8IXK2	581 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	DPP10	Q8N608	796 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	FDCSP	Q8NFU4	85 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	OR7G2	Q8NG99	324 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	OR11G2	Q8NGC1	345 aa		11.11	□□□□□ -0.63
PVT1-215	ENST00000522963	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.11	□□□□□ -0.63

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