RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 WNT7BP56706 349 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 POU4F2Q12837 409 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 C16orf78Q8WTQ4 265 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 ALOXE3Q9BYJ1 711 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 BCAT2O15382 392 aaPredicted RBP15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF28P17035 718 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 FUT4P22083 530 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 SOX9P48436 509 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TPTEP56180 551 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 OR4D1Q15615 310 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TSC22D1Q15714 1073 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 PNCKQ6P2M8 343 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TRIM73Q86UV7 250 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 CDRT4Q8N9R6 151 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 RADILQ96JH8 1075 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 SARDHQ9UL12 918 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 MKLN1Q9UL63 735 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 RNF6Q9Y252 685 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 OR52A4PA6NMU1 304 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 OR2AT4A6NND4 320 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 EEDO75530 441 aaKnown RBP15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 OXSR1O95747 527 aaPredicted RBP15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 PTNP21246 168 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TUBB3Q13509 450 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TRAM1Q15629 374 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TIMM29Q9BSF4 260 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF224Q9NZL3 707 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ACAD8Q9UKU7 415 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 PTRH2Q9Y3E5 179 aaKnown RBP15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 SIT1Q9Y3P8 196 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 CRYBG1Q9Y4K1 1723 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 NRXN3Q9Y4C0 1643 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 IGHEP01854 428 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 CLCN2P51788 898 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ST3GAL4Q11206 333 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 SLC14A2Q15849 920 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 PDSS2Q86YH6 399 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 OR5T2Q8NGG2 359 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 GPR150Q8NGU9 434 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 RLN3Q8WXF3 142 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 SLC45A3Q96JT2 553 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 SFXN2Q96NB2 322 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TUBA1CQ9BQE3 449 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF451Q9Y4E5 1061 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ATE1O95260 518 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ARG2P78540 354 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ATP6AP1Q15904 470 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 MEP1AQ16819 746 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 TP53INP2Q8IXH6 220 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 PROKR1Q8TCW9 393 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 ECHDC3Q96DC8 303 aa15.47■□□□□ 0.07
PCDHA3-201ENST00000522353 KANTRA0A1W2PQU2 76 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 CEBPGP53567 150 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 MAZP56270 477 aaKnown RBP15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 MLC1Q15049 377 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 FAM78AQ5JUQ0 283 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 UBE2Q1Q7Z7E8 422 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 PCTPQ9UKL6 214 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 GON4LQ3T8J9 2241 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 BAZ2AQ9UIF9 1905 aaKnown RBP15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 SLC22A31A6NKX4 558 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 H0YAE9 185 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 NDUFV2P19404 249 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 GALNT10Q86SR1 603 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 ARHGAP12Q8IWW6 846 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 IL17RCQ8NAC3 791 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 OR8J1Q8NGP2 316 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 CREB3L4Q8TEY5 395 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 GAL3ST3Q96A11 431 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 KLHL42Q9P2K6 505 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 DNMT3BQ9UBC3 853 aaKnown RBP15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 SCP2D1Q9UJQ7 156 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 FANCGO15287 622 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 FMO6PO60774 539 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF43P17038 809 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 VAMP1P23763 118 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 AK4P27144 223 aaPredicted RBP15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 YPEL5P62699 121 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF404Q494X3 552 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 ALG10BQ5I7T1 473 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 HSD11B1LQ7Z5J1 315 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 GPR26Q8NDV2 337 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 KLHDC9Q8NEP7 349 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 ELP5Q8TE02 316 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 TANKQ92844 425 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 URM1Q9BTM9 101 aaKnown RBP15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 SRA1Q9HD15 236 aaKnown RBP15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 GMEB1Q9Y692 573 aa15.46■□□□□ 0.07
PCDHA3-201ENST00000522353 DISC1C4P0D8 188 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 NFATC4Q14934 902 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 CDK10Q15131 360 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 IRF4Q15306 451 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 HSF5Q4G112 596 aaPredicted RBP15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 C3orf33Q6P1S2 294 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 ENPP6Q6UWR7 440 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 ISCA2Q86U28 154 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 OR52N2Q8NGI0 321 aa15.46■□□□□ 0.06
PCDHA3-201ENST00000522353 OR2T4Q8NH00 348 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms