RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MEX3BQ6ZN04 569 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 GSPT2Q8IYD1 628 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 DND1Q8IYX4 353 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 PRR22Q8IZ63 422 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 C1orf52Q8N6N3 182 aaKnown RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 OR10Q1Q8NGQ4 319 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 DIO2Q92813 273 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 TMEM237Q96Q45 408 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 DOHHQ9BU89 302 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 ZNF703Q9H7S9 590 aaPredicted RBP19.03■□□□□ 0.64
SDCBP-209ENST00000522243 BRF2Q9HAW0 419 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 SPRR3Q9UBC9 169 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 CES1P1Q9UKY3 287 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 NPFFR2Q9Y5X5 522 aa19.03■□□□□ 0.64
SDCBP-209ENST00000522243 FIGNL2A6NMB9 653 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 MANBAO00462 879 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 SUSD5O60279 629 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 GUCY1B2O75343 617 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 ENDOUP21128 410 aaKnown RBP19.02■□□□□ 0.64
SDCBP-209ENST00000522243 CHRNB4P30926 498 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 ALDH9A1P49189 494 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 DUSP2Q05923 314 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 SLC29A2Q14542 456 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 ACAD11Q709F0 780 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 LILRB4Q8NHJ6 448 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 ADIPOR1Q96A54 375 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 TP53INP1Q96A56 240 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 SARAFQ96BY9 339 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 LURAP1Q96LR2 239 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 ENKD1Q9H0I2 346 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 SLC6A15Q9H2J7 730 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 TBK1Q9UHD2 729 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 DTX4Q9Y2E6 619 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 FAM215AQ9Y5M1 114 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 CENPEQ02224 2701 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 EXPH5Q8NEV8 1989 aa19.02■□□□□ 0.64
SDCBP-209ENST00000522243 FREM3P0C091 2139 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 CREBBPQ92793 2442 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 TP53I11O14683 189 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 S1PR1P21453 382 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 ATP5F1P24539 256 aaPredicted RBP19.01■□□□□ 0.63
SDCBP-209ENST00000522243 HMOX2P30519 316 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 TRPC1P48995 793 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 EXOSC7Q15024 291 aaKnown RBP19.01■□□□□ 0.63
SDCBP-209ENST00000522243 RASA2Q15283 850 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 RPS6KA2Q15349 733 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 NNATQ16517 81 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 PRICKLE4Q2TBC4 344 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 WLSQ5T9L3 541 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 RTL6Q6ICC9 239 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 GPRIN3Q6ZVF9 776 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 SIMC1Q8NDZ2 872 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 ADCY4Q8NFM4 1077 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 SPPL2AQ8TCT8 520 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 KLHL29Q96CT2 875 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 SPOCK3Q9BQ16 436 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 TTYH2Q9BSA4 534 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 NMRK1Q9NWW6 199 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 MAT2BQ9NZL9 334 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 VPS29Q9UBQ0 182 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 BCAP29Q9UHQ4 241 aa19.01■□□□□ 0.63
SDCBP-209ENST00000522243 GOLGA6L10A6NI86 522 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 CAPN14A8MX76 684 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 HCN1O60741 890 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 ESRRBO95718 433 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 KRT6AP02538 564 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 KRT6BP04259 564 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 GLI4P10075 376 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 PYGBP11216 843 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 CSNK2A2P19784 350 aaPredicted RBP19■□□□□ 0.63
SDCBP-209ENST00000522243 IMPDH1P20839 514 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 GPX3P22352 226 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 KRT6CP48668 564 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 HTR6P50406 440 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 MGAT2Q10469 447 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 TMEM198Q66K66 360 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 B3GNT6Q6ZMB0 384 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 LRRC25Q8N386 305 aaPredicted RBP19■□□□□ 0.63
SDCBP-209ENST00000522243 VWA5B2Q8N398 1253 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 LRRN4CLQ8ND94 238 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 OR7G1Q8NGA0 311 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 METTL6Q8TCB7 284 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 CHTF18Q8WVB6 975 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 ZNF597Q96LX8 424 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 ZNF382Q96SR6 550 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 TXLNGYQ9BZA5 131 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 NXF5Q9H1B4 397 aaKnown RBP19■□□□□ 0.63
SDCBP-209ENST00000522243 EPB41L4BQ9H329 900 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 KCNJ16Q9NPI9 418 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 PSMC3IPQ9P2W1 217 aaPredicted RBP19■□□□□ 0.63
SDCBP-209ENST00000522243 HEY2Q9UBP5 337 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 TIMM22Q9Y584 194 aa19■□□□□ 0.63
SDCBP-209ENST00000522243 FOXO6A8MYZ6 492 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 TRIM3O75382 744 aaPredicted RBP18.99■□□□□ 0.63
SDCBP-209ENST00000522243 TOXO94900 526 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 GDF1P27539 372 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 SSTR2P30874 369 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 PRKAA2P54646 552 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 NRG3P56975 720 aa18.99■□□□□ 0.63
SDCBP-209ENST00000522243 KRTAP10-9P60411 292 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms