RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 DGAT2Q96PD7 388 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 SPATA9Q9BWV2 254 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 SPRY4Q9C004 299 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 VN1R1Q9GZP7 353 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 KAT8Q9H7Z6 458 aaKnown RBP12.23□□□□□ -0.45
CPNE3-205ENST00000522240 C3orf14Q9HBI5 128 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 NECTIN3Q9NQS3 549 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 SUCOQ9UBS9 1254 aaKnown RBP12.23□□□□□ -0.45
CPNE3-205ENST00000522240 CD300AQ9UGN4 299 aa12.23□□□□□ -0.45
CPNE3-205ENST00000522240 TCRBV16S1A1N1A0A5B0 115 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 PRORSD1PA6NEY8 169 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 FAM220BPB1ANY3 271 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 EMC8O43402 210 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 OR10H2O60403 315 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 PLOD3O60568 738 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 GPX2P18283 190 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 MAOAP21397 527 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 CD82P27701 267 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 CHI3L1P36222 383 aaPredicted RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 MC3RP41968 323 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 CCT3P49368 545 aaKnown RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 BTG2P78543 158 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 BNIP2Q12982 314 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 CEACAM7Q14002 265 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 SELPLGQ14242 412 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 LTB4RQ15722 352 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 PRICKLE4Q2TBC4 344 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 VWA2Q5GFL6 755 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 MFSD4BQ5TF39 518 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 TMEM107Q6UX40 140 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 TMPRSS7Q7RTY8 843 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 NET1Q7Z628 596 aaPredicted RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 GALNT12Q8IXK2 581 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 OR2L13Q8N349 312 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 FBXW8Q8N3Y1 598 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 GALNT6Q8NCL4 622 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 OR5AK3PQ8NH89 298 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 MR1Q95460 341 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 ELP4Q96EB1 424 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 ZNF578Q96N58 590 aaPredicted RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 PTCHD1Q96NR3 888 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 SPSB2Q99619 263 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 THUMPD3Q9BV44 507 aaKnown RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 ALOXE3Q9BYJ1 711 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 MUC13Q9H3R2 512 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 IKZF5Q9H5V7 419 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 POLR1BQ9H9Y6 1135 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 ADAP2Q9NPF8 381 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 ZCCHC3Q9NUD5 404 aaKnown RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 DDX18Q9NVP1 670 aaKnown RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 MAT2BQ9NZL9 334 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 GPN3Q9UHW5 284 aaPredicted RBP12.22□□□□□ -0.45
CPNE3-205ENST00000522240 ACSL6Q9UKU0 697 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 SNX8Q9Y5X2 465 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 BAHCC1Q9P281 2608 aa12.22□□□□□ -0.45
CPNE3-205ENST00000522240 PTPRBP23467 1997 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 ANKRD65E5RJM6 399 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 PCDH17O14917 1159 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 PDE5AO76074 875 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 RECKO95980 971 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 RAB40ALP0C0E4 278 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 BMP2P12643 396 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 NT5EP21589 574 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 ME2P23368 584 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 GSK3BP49841 420 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 ANXA11P50995 505 aaKnown RBP12.21□□□□□ -0.45
CPNE3-205ENST00000522240 EFNA3P52797 238 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 MVDP53602 400 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 GABREP78334 506 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 LIPEQ05469 1076 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 DMTNQ08495 405 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 MAP4K2Q12851 820 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 NCF4Q15080 339 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 ELAVL1Q15717 326 aaKnown RBP12.21□□□□□ -0.45
CPNE3-205ENST00000522240 FHL5Q5TD97 284 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 C6orf15Q6UXA7 325 aaPredicted RBP12.21□□□□□ -0.45
CPNE3-205ENST00000522240 SERPINA11Q86U17 422 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 CALHM3Q86XJ0 350 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 VWA5B2Q8N398 1253 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 ESX1Q8N693 406 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 MIPOL1Q8TD10 442 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 TSLPQ969D9 159 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 CTHRC1Q96CG8 243 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 SLC35G5Q96KT7 338 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 MS4A4EQ96PG1 132 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 ECSITQ9BQ95 431 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 TRIM8Q9BZR9 551 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 CHST8Q9H2A9 424 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 CXorf21Q9HAI6 301 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 FOXJ2Q9P0K8 574 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 SLC7A8Q9UHI5 535 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 ZNF639Q9UID6 485 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 MKL2Q9ULH7 1088 aa12.21□□□□□ -0.45
CPNE3-205ENST00000522240 C19orf53Q9UNZ5 99 aaPredicted RBP12.21□□□□□ -0.45
CPNE3-205ENST00000522240 IDSB3KWA1 339 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 DYRK3O43781 588 aa12.2□□□□□ -0.46
CPNE3-205ENST00000522240 CNOT3O75175 753 aaKnown RBP12.2□□□□□ -0.46
CPNE3-205ENST00000522240 COQ9O75208 318 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms