RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SEMA3GQ9NS98 782 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 CMTM6Q9NX76 183 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 UPK1AO00322 258 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 DXOO77932 396 aaKnown RBP12.5□□□□□ -0.41
CLK4-210ENST00000522136 CHI3L1P36222 383 aaPredicted RBP12.5□□□□□ -0.41
CLK4-210ENST00000522136 OR4D2P58180 307 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 DNASE1L3Q13609 305 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 TP53BP2Q13625 1128 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 FHL5Q5TD97 284 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 DTX1Q86Y01 620 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 GALNT12Q8IXK2 581 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 RNF148Q8N7C7 305 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 METTL21AQ8WXB1 218 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 TMEM125Q96AQ2 219 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 CTHRC1Q96CG8 243 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 HOPXQ9BPY8 73 aaPredicted RBP12.5□□□□□ -0.41
CLK4-210ENST00000522136 THTPAQ9BU02 230 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 THUMPD3Q9BV44 507 aaKnown RBP12.5□□□□□ -0.41
CLK4-210ENST00000522136 CNPPD1Q9BV87 410 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 PIF1Q9H611 641 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 EPS8L2Q9H6S3 715 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 ZCCHC3Q9NUD5 404 aaKnown RBP12.5□□□□□ -0.41
CLK4-210ENST00000522136 ADA2Q9NZK5 511 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
CLK4-210ENST00000522136 MRPS18BQ9Y676 258 aaKnown RBP12.5□□□□□ -0.41
CLK4-210ENST00000522136 C17orf105B2RV13 164 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 NME4O00746 187 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 TERTO14746 1132 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 GSC2O15499 205 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 SORBS2O94875 1100 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 RAB40ALP0C0E4 278 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 S1PR1P21453 382 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 SSTR4P31391 388 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 FOLR3P41439 243 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 RPS15P62841 145 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 RPS26P62854 115 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 MAP4K2Q12851 820 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 SFT2D3Q587I9 215 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 COX20Q5RI15 118 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ANGPTL8Q6UXH0 198 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 C6orf120Q7Z4R8 191 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 VWA5B2Q8N398 1253 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 TRIML2Q8N7C3 387 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ZNF321PQ8N8H1 164 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 NUP43Q8NFH3 380 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ZNF675Q8TD23 568 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 YIPF4Q9BSR8 244 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ADAP2Q9NPF8 381 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 EQTNQ9NQ60 294 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 THSD1Q9NS62 852 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 DDX18Q9NVP1 670 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 GPATCH2Q9NW75 528 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 USP22Q9UPT9 525 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 PLOD2O00469 737 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 EMC8O43402 210 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 CBX7O95931 251 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 CD82P27701 267 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 SOX11P35716 441 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ID4P47928 161 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 DUSP8Q13202 625 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 BIKQ13323 160 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ELAVL1Q15717 326 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 DNAL1Q4LDG9 190 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLK4-210ENST00000522136 SAXO2Q658L1 398 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 WDR53Q7Z5U6 358 aaPredicted RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 RNF130Q86XS8 419 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 OR2L13Q8N349 312 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 IL22RA1Q8N6P7 574 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 OTUB1Q96FW1 271 aaPredicted RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 C16orf58Q96GQ5 468 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 SENP5Q96HI0 755 aaPredicted RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 PELOQ9BRX2 385 aaKnown RBP12.49□□□□□ -0.41
CLK4-210ENST00000522136 C3orf14Q9HBI5 128 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 SPAG4Q9NPE6 437 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 NDE1Q9NXR1 346 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 TMEM181Q9P2C4 612 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 IL17BQ9UHF5 180 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 ZNF639Q9UID6 485 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 CLCA3PQ9Y6N3 262 aa12.49□□□□□ -0.41
CLK4-210ENST00000522136 PLOD3O60568 738 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 DNAJC8O75937 253 aaPredicted RBP12.48□□□□□ -0.41
CLK4-210ENST00000522136 PDE5AO76074 875 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 MSX2P35548 267 aaPredicted RBP12.48□□□□□ -0.41
CLK4-210ENST00000522136 PGM1P36871 562 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 MVDP53602 400 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 KCNJ2P63252 427 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 EEF1A2Q05639 463 aaKnown RBP12.48□□□□□ -0.41
CLK4-210ENST00000522136 TMEM64Q6YI46 380 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 BNC2Q6ZN30 1099 aaPredicted RBP12.48□□□□□ -0.41
CLK4-210ENST00000522136 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
CLK4-210ENST00000522136 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 OR52R1Q8NGF1 315 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 OR8J3Q8NGG0 315 aa12.48□□□□□ -0.41
CLK4-210ENST00000522136 OR10A6Q8NH74 314 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms