RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 UGDHO60701 494 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 SRCP12931 536 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 EPCAMP16422 314 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 SDC1P18827 310 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 TNFRSF1BP20333 461 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 SELENOWP63302 87 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 RPL6Q02878 288 aaKnown RBP13.17□□□□□ -0.3
SYNPO-205ENST00000522122 IER5LQ5T953 404 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 DPH7Q9BTV6 452 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 NTMT1Q9BV86 223 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 SERINC1Q9NRX5 453 aa13.17□□□□□ -0.3
SYNPO-205ENST00000522122 CLDN24A6NM45 220 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ADH1BP00325 375 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 CPZQ66K79 652 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 XKRXQ6PP77 449 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF227Q86WZ6 799 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 NRSN1Q8IZ57 195 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 OR52P1PQ8NH57 321 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ECHDC3Q96DC8 303 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 TTTY10Q9BZA0 68 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 KCNK12Q9HB15 430 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 TPD52L2O43399 206 aaKnown RBP13.16□□□□□ -0.3
SYNPO-205ENST00000522122 GJB3O75712 270 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 CCL5P13501 91 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
SYNPO-205ENST00000522122 MAGEA2P43356 314 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF267Q14586 743 aaPredicted RBP13.16□□□□□ -0.3
SYNPO-205ENST00000522122 TRAM1Q15629 374 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 SCGB2B2Q4G0G5 96 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 AFMIDQ63HM1 303 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 UNC5DQ6UXZ4 953 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 TMEM17Q86X19 198 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 GATAD2BQ8WXI9 593 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 MROQ9BYG7 248 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ZBTB20Q9HC78 741 aaPredicted RBP13.16□□□□□ -0.3
SYNPO-205ENST00000522122 MEMO1Q9Y316 297 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 RBMXL2O75526 392 aaKnown RBP13.16□□□□□ -0.3
SYNPO-205ENST00000522122 PYCR1P32322 319 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 AFF1P51825 1210 aaKnown RBP13.16□□□□□ -0.3
SYNPO-205ENST00000522122 CAMK1Q14012 370 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 RAB33AQ14088 237 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 PRRT3Q5FWE3 981 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 RPL13AP3Q6NVV1 102 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 CEACAM19Q7Z692 300 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 AVL9Q8NBF6 648 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 THRSPQ92748 146 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF583Q96ND8 569 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 C12orf4Q9NQ89 552 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 RDH8Q9NYR8 311 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 GPR37L1O60883 481 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 FUCA1P04066 466 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ZXDBP98169 803 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 TMEM35AQ53FP2 167 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 AGAP7PQ5VUJ5 663 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 TBPL2Q6SJ96 375 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 SLC29A4Q7RTT9 530 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ASPGQ86U10 573 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 MCEMP1Q8IX19 187 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF101Q8IZC7 436 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 AKAP1Q92667 903 aaKnown RBP eCLIP13.16□□□□□ -0.3
SYNPO-205ENST00000522122 NELL2Q99435 816 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 ACOT13Q9NPJ3 140 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
SYNPO-205ENST00000522122 NPIPB15A6NHN6 443 aaPredicted RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF726A6NNF4 738 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 OSMP13725 252 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 NDUFV2P19404 249 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 MTNR1AP48039 350 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 MICAQ29983 383 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ODF4Q2M2E3 257 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 BTBD16Q32M84 506 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 DEFB134Q4QY38 66 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 CATSPEREQ5SY80 951 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 STX12Q86Y82 276 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 TMEM25Q86YD3 366 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 CHST14Q8NCH0 376 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 NSMAFQ92636 917 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 P2RY13Q9BPV8 354 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 AP1M2Q9Y6Q5 423 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 GRXCR1A8MXD5 290 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 LCN1P31025 176 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ACTC1P68032 377 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ACTA1P68133 377 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 EIF4HQ15056 248 aaKnown RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 ZNF615Q8N8J6 731 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 JSRP1Q96MG2 331 aaPredicted RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 OR2M4Q96R27 311 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
SYNPO-205ENST00000522122 HRASLS2Q9NWW9 162 aa13.15□□□□□ -0.3
SYNPO-205ENST00000522122 LAMP5Q9UJQ1 280 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms