RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ZNF615Q8N8J6 731 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 SPPL2AQ8TCT8 520 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 NRGNQ92686 78 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 NSUN5Q96P11 429 aaKnown RBP13.91□□□□□ -0.18
CSMD1-207ENST00000520451 NTMT1Q9BV86 223 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 MRPL1Q9BYD6 325 aaKnown RBP13.91□□□□□ -0.18
CSMD1-207ENST00000520451 OR10A5Q9H207 317 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 AHSPQ9NZD4 102 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 XPR1Q9UBH6 696 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 ADAM29Q9UKF5 820 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 TMCO1Q9UM00 188 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 NCKAP5O14513 1909 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 MTORP42345 2549 aa13.91□□□□□ -0.18
CSMD1-207ENST00000520451 SETD2Q9BYW2 2564 aaPredicted RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 STX16-NPEPL1H3BU86 382 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 STX16O14662 325 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 SMIM24O75264 130 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 SNX4O95219 450 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ACSL3O95573 720 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 CPMP14384 443 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 CD1EP15812 388 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 KRT15P19012 456 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 MAGEA12P43365 314 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 MAPK12P53778 367 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 RPP38P78345 283 aaKnown RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 CRYZQ08257 329 aaKnown RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 SNTB1Q13884 538 aaKnown RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ACSF3Q4G176 576 aaPredicted RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 C10orf62Q5T681 223 aaPredicted RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 PACS2Q86VP3 889 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ZZZ3Q8IYH5 903 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 OR7G1Q8NGA0 311 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 SLC44A1Q8WWI5 657 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ADIPOR1Q96A54 375 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 SECISBP2Q96T21 854 aaKnown RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ANGPTL4Q9BY76 406 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ELOVL6Q9H5J4 265 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ZBTB26Q9HCK0 441 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 DNAJB12Q9NXW2 375 aaKnown RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 MTRF1LQ9UGC7 380 aaKnown RBP13.9□□□□□ -0.18
CSMD1-207ENST00000520451 IKBKGQ9Y6K9 419 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 NINQ8N4C6 2090 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 MED13LQ71F56 2210 aa13.9□□□□□ -0.18
CSMD1-207ENST00000520451 ZFHX3Q15911 3703 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 ANKHD1Q8IWZ3 2542 aaKnown RBP13.89□□□□□ -0.19
CSMD1-207ENST00000520451 AHRRA9YTQ3 701 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 KDM4EB2RXH2 506 aaPredicted RBP13.89□□□□□ -0.19
CSMD1-207ENST00000520451 DVL2O14641 736 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 PORP16435 677 aaPredicted RBP13.89□□□□□ -0.19
CSMD1-207ENST00000520451 BMP5P22003 454 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 DNAJA1P31689 397 aaKnown RBP13.89□□□□□ -0.19
CSMD1-207ENST00000520451 UQCRC1P31930 480 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 CASP3P42574 277 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 KIR2DL3P43628 341 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 CDK9P50750 372 aaKnown RBP13.89□□□□□ -0.19
CSMD1-207ENST00000520451 WNT3P56703 355 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 TOMM20Q15388 145 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 NNATQ16517 81 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 TSNAXIP1Q2TAA8 658 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 GGTA1PQ4G0N0 100 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 RPS27LQ71UM5 84 aaKnown RBP13.89□□□□□ -0.19
CSMD1-207ENST00000520451 TAOK1Q7L7X3 1001 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 COMMD6Q7Z4G1 85 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 MILR1Q7Z6M3 343 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 VWA5B2Q8N398 1253 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 METTL4Q8N3J2 472 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 RELL2Q8NC24 303 aaPredicted RBP13.89□□□□□ -0.19
CSMD1-207ENST00000520451 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 C17orf47Q8NEP4 570 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 TNIP2Q8NFZ5 429 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 OR4F6Q8NGB9 312 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 ISL2Q96A47 359 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 GNRHR2Q96P88 292 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 PAFAH2Q99487 392 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 TIMP4Q99727 224 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 BRINP2Q9C0B6 783 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 UBQLN3Q9H347 655 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 SLC12A4Q9UP95 1085 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 DTX4Q9Y2E6 619 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 C15orf41Q9Y2V0 281 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 SLC6A5Q9Y345 797 aa13.89□□□□□ -0.19
CSMD1-207ENST00000520451 GOLGA6L10A6NI86 522 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 GUCY1B2O75343 617 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 CTAG2O75638 210 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 EPPINO95925 133 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 HPNP05981 417 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 GPX3P22352 226 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 ABCD3P28288 659 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 DEKP35659 375 aaKnown RBP13.88□□□□□ -0.19
CSMD1-207ENST00000520451 SERPINB9P50453 376 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 ASCL1P50553 236 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 FNDC7Q5VTL7 733 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 SLC48A1Q6P1K1 146 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 RELL1Q8IUW5 271 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 LACC1Q8IV20 430 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 PM20D2Q8IYS1 436 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 LRRC46Q96FV0 321 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 POLDIP3Q9BY77 421 aaKnown RBP13.88□□□□□ -0.19
CSMD1-207ENST00000520451 FUT8Q9BYC5 575 aa13.88□□□□□ -0.19
CSMD1-207ENST00000520451 NXF5Q9H1B4 397 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms