RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	CCDC137	Q6PK04	289 aa	Known RBP	6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	LCTL	Q6UWM7	567 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	NLRP9	Q7RTR0	991 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	TAS2R42	Q7RTR8	314 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	SNX20	Q7Z614	316 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	PXK	Q7Z7A4	578 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	C17orf82	Q86X59	251 aa	Predicted RBP	6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	ZNF547	Q8IVP9	402 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	NAGS	Q8N159	534 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	C17orf53	Q8N3J3	647 aa	Predicted RBP	6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	ARL14	Q8N4G2	192 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	GRK7	Q8WTQ7	553 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	HEXDC	Q8WVB3	486 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	PATE1	Q8WXA2	126 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	MIB2	Q96AX9	1013 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	ULK4	Q96C45	1275 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	DCUN1D1	Q96GG9	259 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	CDKN2AIPNL	Q96HQ2	116 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	ZNF514	Q96K75	400 aa	Predicted RBP	6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	COPS8	Q99627	209 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	TIMM29	Q9BSF4	260 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	OSGEPL1	Q9H4B0	414 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	FAM96A	Q9H5X1	160 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	ESRP2	Q9H6T0	727 aa	Known RBP	6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	SYNDIG1	Q9H7V2	258 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	MKKS	Q9NPJ1	570 aa	Predicted RBP	6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	BFAR	Q9NZS9	450 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	CRLS1	Q9UJA2	301 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	SAR1B	Q9Y6B6	198 aa		6.57	□□□□□ -1.36
SDCBP-208	ENST00000520228	EPG5	Q9HCE0	2579 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	TPR	P12270	2363 aa	Known RBP	6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228		A0A0G2JNG1	304 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CCDC162P	A2VCL2	907 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	TRABD2B	A6NFA1	517 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR2AG2	A6NM03	316 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR5K4	A6NMS3	321 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	AGAP14	A8MT82	685 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	PDZK1P1	A8MUH7	402 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228		H7C0S8	307 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	KCNJ13	O60928	360 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CS	O75390	466 aa	Known RBP	6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	EML2	O95834	649 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	RPLP0	P05388	317 aa	Known RBP	6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	SPARC	P09486	303 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	F3	P13726	295 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	TPSB2	P20231	275 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	IDS	P22304	550 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	PSMA3	P25788	255 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	ALDH4A1	P30038	563 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CA5A	P35218	305 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	PIGA	P37287	484 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	NPY2R	P49146	381 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CLCNKA	P51800	687 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CTSC	P53634	463 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	TERF1	P54274	439 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR1D5	P58170	312 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CACNG1	Q06432	222 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CRYZ	Q08257	329 aa	Known RBP	6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	ERV3-1	Q14264	604 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	KIR2DS5	Q14953	304 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	PPP1R7	Q15435	360 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	TPSAB1	Q15661	275 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	C2orf68	Q2NKX9	166 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	HIST2H2BC	Q6DN03	193 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	HIST2H2BD	Q6DRA6	164 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	TMEM220	Q6QAJ8	160 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	QSOX2	Q6ZRP7	698 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	DET1	Q7L5Y6	550 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	AMZ2	Q86W34	360 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	SFRP1	Q8N474	314 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	ZBTB2	Q8N680	514 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	TMEM116	Q8NCL8	245 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	HUS1B	Q8NHY5	278 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	SLC37A2	Q8TED4	501 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	SGF29	Q96ES7	293 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CAPZA3	Q96KX2	299 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	RANBP9	Q96S59	729 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	FAM110A	Q9BQ89	295 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	IL22	Q9GZX6	179 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	MUC13	Q9H3R2	512 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	LRRN3	Q9H3W5	708 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CHRAC1	Q9NRG0	131 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	SLC2A6	Q9UGQ3	507 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	CEP192	Q8TEP8	1941 aa		6.56	□□□□□ -1.36
SDCBP-208	ENST00000520228	PCNX2	A6NKB5	2137 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	ADAMTS9	Q9P2N4	1935 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	TRBV5-4	A0A0C4DH59	114 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	DYTN	A2CJ06	578 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228		A6NCN8	305 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	TMEM8B	A6NDV4	472 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	MGAT4D	A6NG13	374 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR51F1	A6NGY5	319 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	TMX2-CTNND1	H3BSU7	103 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	NTN3	O00634	580 aa	Predicted RBP	6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	CASC3	O15234	703 aa	Known RBP	6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	B4GAT1	O43505	415 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	ALPL	P05186	524 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	PROS1	P07225	676 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	ATP1B2	P14415	290 aa	Predicted RBP	6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	PBLD	P30039	288 aa	Predicted RBP	6.55	□□□□□ -1.36

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