RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 FAM214AQ32MH5 1076 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 RFX4Q33E94 735 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 ATAD3BQ5T9A4 648 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 YOD1Q5VVQ6 348 aaPredicted RBP11.23□□□□□ -0.61
LMNA-224ENST00000515711 OR2T5Q6IEZ7 315 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 TMEM107Q6UX40 140 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 FAM181AQ8N9Y4 354 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 NUP43Q8NFH3 380 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 OR9A2Q8NGT5 310 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 OR2T29Q8NH02 315 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 ZNF675Q8TD23 568 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 SAP25Q8TEE9 199 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 NAT6Q93015 286 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 UCN3Q969E3 161 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 MVB12AQ96EY5 273 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 NRBF2Q96F24 287 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 TMEM19Q96HH6 336 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 TPD52L3Q96J77 140 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 ZNF347Q96SE7 839 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 SLC29A1Q99808 456 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 RBM4BQ9BQ04 359 aaKnown RBP11.23□□□□□ -0.61
LMNA-224ENST00000515711 RBM4Q9BWF3 364 aaKnown RBP11.23□□□□□ -0.61
LMNA-224ENST00000515711 BTBD2Q9BX70 525 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
LMNA-224ENST00000515711 GABARAPL1Q9H0R8 117 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 TRIM45Q9H8W5 580 aaPredicted RBP11.23□□□□□ -0.61
LMNA-224ENST00000515711 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 FANCEQ9HB96 536 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 BATF3Q9NR55 127 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 TMEM74BQ9NUR3 256 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
LMNA-224ENST00000515711 IRAK4Q9NWZ3 460 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 SMPD3Q9NY59 655 aaPredicted RBP11.23□□□□□ -0.61
LMNA-224ENST00000515711 USE1Q9NZ43 259 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 TRPC4Q9UBN4 977 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 LIPT1Q9Y234 373 aa11.23□□□□□ -0.61
LMNA-224ENST00000515711 HYKKA2RU49 373 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 ZNF860A6NHJ4 632 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SGK494L7N484 410 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 UPK1AO00322 258 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 HRO43593 1189 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SLC28A2O43868 658 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 B4GALT2O60909 372 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 RDH16O75452 317 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SERPINB7O75635 380 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SOX30O94993 753 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 CFIP05156 583 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SYPP08247 313 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 TFPTP0C1Z6 253 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 NR2F1P10589 423 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 COL5A1P20908 1838 aaPredicted RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 FPR1P21462 350 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 AQP1P29972 269 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 MC3RP41968 323 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 ARSFP54793 590 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 CASP9P55211 416 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 RPS26P62854 115 aaKnown RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 OLR1P78380 273 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 KCNJ10P78508 379 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SIM1P81133 766 aaPredicted RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 BIKQ13323 160 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SQSTM1Q13501 440 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 LASP1Q14847 261 aaKnown RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 PDK3Q15120 406 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 HLA-BQ31612 363 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 ZCCHC12Q6PEW1 402 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SHQ1Q6PI26 577 aaKnown RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 PRSS41Q7RTY9 318 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 VTCN1Q7Z7D3 282 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 ZNF595Q8IYB9 648 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 OR2L13Q8N349 312 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 D2HGDHQ8N465 521 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 SLC38A5Q8WUX1 472 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 CCDC74AQ96AQ1 378 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 TAMM41Q96BW9 452 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 PELOQ9BRX2 385 aaKnown RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 ACTRT3Q9BYD9 372 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 ANKRD60Q9BZ19 345 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 ZNF768Q9H5H4 540 aaKnown RBP11.22□□□□□ -0.61
LMNA-224ENST00000515711 REEP1Q9H902 201 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 BCL2L10Q9HD36 194 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 EXD2Q9NVH0 621 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 ORC6Q9Y5N6 252 aa11.22□□□□□ -0.61
LMNA-224ENST00000515711 C7orf72A4D263 438 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 SYNDIG1LA6NDD5 238 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 WASHC1A8K0Z3 465 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 H0YAE9 185 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 M0QX08 132 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 PDLIM1O00151 329 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 CLDN4O14493 209 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 CHST10O43529 356 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 HCRTR1O43613 425 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 KIF1CO43896 1103 aaKnown RBP11.21□□□□□ -0.61
LMNA-224ENST00000515711 FGF17O60258 216 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 COQ9O75208 318 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 GCM2O75603 506 aaPredicted RBP11.21□□□□□ -0.61
LMNA-224ENST00000515711 PGM3O95394 542 aa11.21□□□□□ -0.61
LMNA-224ENST00000515711 HMGN2P05204 90 aaKnown RBP11.21□□□□□ -0.61
LMNA-224ENST00000515711 ANKRD34CP0C6C1 535 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms