RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CHTF18Q8WVB6 975 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 KCNJ16Q9NPI9 418 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 PFDN4Q9NQP4 134 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 QPCTLQ9NXS2 382 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 ALKBH4Q9NXW9 302 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 FETUBQ9UGM5 382 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 DCDC2Q9UHG0 476 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 BCAP29Q9UHQ4 241 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 RNF6Q9Y252 685 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 HRH3Q9Y5N1 445 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 NPFFR2Q9Y5X5 522 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 LIPGQ9Y5X9 500 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 CHCHD2Q9Y6H1 151 aaPredicted RBP12.58□□□□□ -0.4
TCOF1-215ENST00000515516 MYO7BQ6PIF6 2116 aa12.58□□□□□ -0.4
TCOF1-215ENST00000515516 A0A1B0GTL3 188 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 A0A1W2PS29 197 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 FAM90A27PA6NNH2 459 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 FAM47E-STBD1D6RA91 191 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 GOLGA8RI6L899 631 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 MANBAO00462 879 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 DLX3O60479 287 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 WDR1O75083 606 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 SNX4O95219 450 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 CLPSP04118 112 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 CELA3AP09093 270 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 CT62P0C5K7 136 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 GDF1P27539 372 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 GCAP28676 217 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 FEN1P39748 380 aaKnown RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 NUP107P57740 925 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 GALNT1Q10472 559 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 CSTF3Q12996 717 aaKnown RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 RPS6KA2Q15349 733 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 EMC4Q5J8M3 183 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 B3GNT6Q6ZMB0 384 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 MEX3BQ6ZN04 569 aaKnown RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 PACS2Q86VP3 889 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 VWA5B2Q8N398 1253 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 MARVELD2Q8N4S9 558 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 ZNF615Q8N8J6 731 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 GBP7Q8N8V2 638 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 ZNF441Q8N8Z8 693 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 TM4SF18Q96CE8 201 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 ZNF597Q96LX8 424 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 ZNF382Q96SR6 550 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 SECISBP2Q96T21 854 aaKnown RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 TBK1Q9UHD2 729 aa12.57□□□□□ -0.4
TCOF1-215ENST00000515516 CNOT11Q9UKZ1 510 aaKnown RBP12.57□□□□□ -0.4
TCOF1-215ENST00000515516 GNG14A0A1W2PPG7 69 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 ANKRD33BA6NCL7 494 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 CDH16O75309 829 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 TRAPPC6AO75865 159 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 LRATO95237 230 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 ATP1B1P05026 303 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 ENO1P06733 434 aaKnown RBP12.56□□□□□ -0.4
TCOF1-215ENST00000515516 PYGBP11216 843 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 GABRA1P14867 456 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 MASP1P48740 699 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 PRKAA2P54646 552 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 PKNOX1P55347 436 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 FBXW4P57775 412 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 MAP4K2Q12851 820 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 TMEM64Q6YI46 380 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 CCDC71Q8IV32 467 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-215ENST00000515516 SAMD14Q8IZD0 417 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-215ENST00000515516 C17orf47Q8NEP4 570 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 SPPL2AQ8TCT8 520 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 ADIPOR1Q96A54 375 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 CCDC126Q96EE4 140 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 TMEM237Q96Q45 408 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 HBEGFQ99075 208 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 TRIM8Q9BZR9 551 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 ZNF703Q9H7S9 590 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-215ENST00000515516 ACKR4Q9NPB9 350 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 GIMAP4Q9NUV9 329 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 TNFRSF10DQ9UBN6 386 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 PRODH2Q9UF12 536 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 MCM8Q9UJA3 840 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 UTS2RQ9UKP6 389 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 CES1P1Q9UKY3 287 aa12.56□□□□□ -0.4
TCOF1-215ENST00000515516 FOXO6A8MYZ6 492 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 PCDH7O60245 1069 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 CRCPO75575 148 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 BCAS2O75934 225 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-215ENST00000515516 FAM153BP0C7A2 387 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 RFPL3SP0C7P2 107 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 ACSM2AQ08AH3 577 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 LCP2Q13094 533 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 TOMM20Q15388 145 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 PRICKLE4Q2TBC4 344 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 FAM153CQ494X1 144 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 SPIN4Q56A73 249 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 TCHHL1Q5QJ38 904 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-215ENST00000515516 C1orf185Q5T7R7 199 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 ACSM2BQ68CK6 577 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 PRR22Q8IZ63 422 aa12.55□□□□□ -0.4
TCOF1-215ENST00000515516 LRRC25Q8N386 305 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-215ENST00000515516 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms