RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SCARB1Q8WTV0 552 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 FRG2BQ96QU4 278 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 C12orf57Q99622 126 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 ARHGAP9Q9BRR9 750 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 FN3KQ9H479 309 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 OSGEPL1Q9H4B0 414 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 C8orf33Q9H7E9 229 aaPredicted RBP12.17□□□□□ -0.46
SMAD1-215ENST00000515385 SEMA3GQ9NS98 782 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 IMP3Q9NV31 184 aaKnown RBP12.17□□□□□ -0.46
SMAD1-215ENST00000515385 MARK1Q9P0L2 795 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 DUX4Q9UBX2 424 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
SMAD1-215ENST00000515385 PPIEQ9UNP9 301 aaKnown RBP12.17□□□□□ -0.46
SMAD1-215ENST00000515385 DTX4Q9Y2E6 619 aa12.17□□□□□ -0.46
SMAD1-215ENST00000515385 MRPS7Q9Y2R9 242 aaKnown RBP12.17□□□□□ -0.46
SMAD1-215ENST00000515385 YARS2Q9Y2Z4 477 aaKnown RBP12.17□□□□□ -0.46
SMAD1-215ENST00000515385 TIMM13Q9Y5L4 95 aaPredicted RBP12.17□□□□□ -0.46
SMAD1-215ENST00000515385 PQLC2LA1A4F0 135 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 HNRNPCL2B2RXH8 293 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 H3BN98 237 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 DNASE2O00115 360 aaPredicted RBP12.16□□□□□ -0.46
SMAD1-215ENST00000515385 RNASET2O00584 256 aaKnown RBP12.16□□□□□ -0.46
SMAD1-215ENST00000515385 PDCD5O14737 125 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 CHST10O43529 356 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 SIGLEC6O43699 453 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 PRAF2O60831 178 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 NBNO60934 754 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 NMBP08949 121 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 ZNF286BP0CG31 522 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 ACP2P11117 423 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 EPORP19235 508 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 SMIM11AP58511 58 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 TSPAN5P62079 268 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 TAP2Q03519 686 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 ARHGEF7Q14155 803 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 LTB4RQ15722 352 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 PABPC1L2AQ5JQF8 200 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 MCATQ8IVS2 390 aaKnown RBP12.16□□□□□ -0.46
SMAD1-215ENST00000515385 ARIH2OSQ8N7S6 290 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 OR56B4Q8NH76 319 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 CINPQ9BW66 212 aaPredicted RBP12.16□□□□□ -0.46
SMAD1-215ENST00000515385 SLC19A3Q9BZV2 496 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 UCK1Q9HA47 277 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 GKN1Q9NS71 199 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 PRKAG2Q9UGJ0 569 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 KLF15Q9UIH9 416 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 ING1Q9UK53 422 aaPredicted RBP12.16□□□□□ -0.46
SMAD1-215ENST00000515385 ANGPT4Q9Y264 503 aa12.16□□□□□ -0.46
SMAD1-215ENST00000515385 TRBC2A0A5B9 178 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 THP07101 528 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 CBSLP0DN79 551 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 TYRP14679 529 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 OR1E1P30953 314 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 CBSP35520 551 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 CHI3L1P36222 383 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 ACVRL1P37023 503 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 VSX2P58304 361 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 ACSM1Q08AH1 577 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 NDUFA9Q16795 377 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 ST3GAL2Q16842 350 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 XKR6Q5GH73 641 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 LYPLAL1Q5VWZ2 237 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 FBXL22Q6P050 247 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 TRIM40Q6P9F5 258 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 TMEM91Q6ZNR0 172 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 HTR3DQ70Z44 454 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 NLRC3Q7RTR2 1065 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 KANSL1Q7Z3B3 1105 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 OAFQ86UD1 273 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 NAXDQ8IW45 347 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 MOSPD2Q8NHP6 518 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 GOT1L1Q8NHS2 421 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 IGSF8Q969P0 613 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 CXorf40BQ96DE9 158 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 ZNF582Q96NG8 517 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 SPATA5L1Q9BVQ7 753 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 EBPLQ9BY08 206 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 TMPRSS13Q9BYE2 586 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 MS4A7Q9GZW8 240 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 SPRTNQ9H040 489 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 RNF32Q9H0A6 362 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 POLR2J3Q9H1A7 115 aaKnown RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 TINAGQ9UJW2 476 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 LOC105369274A0A096LPK9 316 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 GABRR3A8MPY1 467 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 L7N2F9 121 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 CACNB4O00305 520 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 KPNA3O00505 521 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 YY2O15391 372 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 TLX2O43763 284 aaPredicted RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 LANCL1O43813 399 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 SRPRAP08240 638 aaKnown RBP12.15□□□□□ -0.46
SMAD1-215ENST00000515385 H2AFB1P0C5Y9 115 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 SYN1P17600 705 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 NPR2P20594 1047 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 MTNR1BP49286 362 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 DGKGP49619 791 aa12.15□□□□□ -0.46
SMAD1-215ENST00000515385 PTPN5P54829 565 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms