RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TMEM64Q6YI46 380 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 LRRC69Q6ZNQ3 347 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 TRPM8Q7Z2W7 1104 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 OR2L13Q8N349 312 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 DPP10Q8N608 796 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 OR7G1Q8NGA0 311 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 DNAJB8Q8NHS0 232 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 SLC2A12Q8TD20 617 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 KAT2AQ92830 837 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 SENP5Q96HI0 755 aaPredicted RBP19.56■□□□□ 0.72
LSM6-207ENST00000515311 DCBLD2Q96PD2 775 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 NTMQ9P121 344 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 DMXL2Q8TDJ6 3036 aa19.56■□□□□ 0.72
LSM6-207ENST00000515311 ANKRD11Q6UB99 2663 aaPredicted RBP19.56■□□□□ 0.72
LSM6-207ENST00000515311 NUP214P35658 2090 aaPredicted RBP19.55■□□□□ 0.72
LSM6-207ENST00000515311 A0A087WV48 116 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 A0A096LPI6 279 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 LOC100653049A0A140TA62 436 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 FBP2O00757 339 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 KRT34O76011 436 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 ICAM2P13598 275 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 S1PR1P21453 382 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 MC3RP41968 323 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 GPR143P51810 404 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 UCNP55089 124 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 MRPS35P82673 323 aaKnown RBP19.55■□□□□ 0.72
LSM6-207ENST00000515311 FOXK2Q01167 660 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 FAM111BQ6SJ93 734 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 CCDC81Q6ZN84 652 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 TRIML2Q8N7C3 387 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 KDF1Q8NAX2 398 aaPredicted RBP19.55■□□□□ 0.72
LSM6-207ENST00000515311 OR7G2Q8NG99 324 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 OR1N1Q8NGS0 311 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 SFXN5Q8TD22 340 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 MOAP1Q96BY2 351 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 FER1L6-AS2Q96M78 137 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 INPP5KQ9BT40 448 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 CNPPD1Q9BV87 410 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 TRIM4Q9C037 500 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 SEMA4CQ9C0C4 833 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 OR8D2Q9GZM6 311 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 CXorf36Q9H7Y0 433 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 C3orf14Q9HBI5 128 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.55■□□□□ 0.72
LSM6-207ENST00000515311 COPS7AQ9UBW8 275 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 VPS4AQ9UN37 437 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 ERVK-11Q9UQG0 969 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 ERVK-19Q9WJR5 959 aa19.55■□□□□ 0.72
LSM6-207ENST00000515311 URB1O60287 2271 aaKnown RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 HRKO00198 91 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 ERN1O75460 977 aaKnown RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 BCAS2O75934 225 aaPredicted RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 CPSF4O95639 269 aaKnown RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 ABCB1P08183 1280 aaPredicted RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 ZCCHC18P0CG32 403 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 PRKAR1AP10644 381 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 PRR5P85299 388 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 TRMT12Q53H54 448 aaKnown RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 PAGE3Q5JUK9 113 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 C6orf10Q5SRN2 563 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 LRIF1Q5T3J3 769 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 RETREG3Q86VR2 466 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 POU5F2Q8N7G0 328 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 APCDD1LQ8NCL9 501 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 M1APQ8TC57 530 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 ZNF721Q8TF20 911 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 VMP1Q96GC9 406 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 PHF12Q96QT6 1004 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 ZNF160Q9HCG1 818 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 MMP25Q9NPA2 562 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 DDX18Q9NVP1 670 aaKnown RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 C19orf53Q9UNZ5 99 aaPredicted RBP19.54■□□□□ 0.72
LSM6-207ENST00000515311 POLHQ9Y253 713 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 SNX8Q9Y5X2 465 aa19.54■□□□□ 0.72
LSM6-207ENST00000515311 TAF4O00268 1085 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 UPK1AO00322 258 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 EMC8O43402 210 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 PRAMEF2O60811 474 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 KCNH1O95259 989 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 PSMG1O95456 288 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 CBX7O95931 251 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 NPPAP01160 153 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 PTPN6P29350 595 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 CDKN2CP42773 168 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 RRADP55042 308 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 AP2B1P63010 937 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 BTBD16Q32M84 506 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 MMEL1Q495T6 779 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 DCAF10Q5QP82 559 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 ATP1A1-AS1Q5TC04 95 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 REP15Q6BDI9 236 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 BHLHB9Q6PI77 547 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 ZNF615Q8N8J6 731 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 PCYOX1LQ8NBM8 494 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 NCLNQ969V3 563 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 FAM120BQ96EK7 910 aaKnown RBP19.53■□□□□ 0.72
LSM6-207ENST00000515311 PAIP1Q9H074 479 aaKnown RBP19.53■□□□□ 0.72
LSM6-207ENST00000515311 CELSR3Q9NYQ7 3312 aa19.53■□□□□ 0.72
LSM6-207ENST00000515311 OR6C76A6NM76 312 aa19.52■□□□□ 0.72
LSM6-207ENST00000515311 MRASO14807 208 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms