RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 C17orf105B2RV13 164 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 RFXANKO14593 260 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 DDAH2O95865 285 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 C6orf47O95873 294 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 HPP00738 406 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 IFNA16P05015 189 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 COX6A1P12074 109 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 TXNL4AP83876 142 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 EXT1Q16394 746 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 COL28A1Q2UY09 1125 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 PAGE3Q5JUK9 113 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 C6orf163Q5TEZ5 329 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 PLAG1Q6DJT9 500 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 FAM180BQ6P0A1 224 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 DLEU7Q6UYE1 221 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 DGAT2L6Q6ZPD8 337 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 NDUFAF7Q7L592 441 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 CLECL1Q8IZS7 167 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 VWA5B2Q8N398 1253 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 TRIML2Q8N7C3 387 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 PCYOX1LQ8NBM8 494 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 B3GNT7Q8NFL0 401 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 OR1N1Q8NGS0 311 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 OR9A2Q8NGT5 310 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 OR8K3Q8NH51 312 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 THAP4Q8WY91 577 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 HOXB13Q92826 284 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 PANX1Q96RD7 426 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 CCNL2Q96S94 520 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 PAIP1Q9H074 479 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 C3orf14Q9HBI5 128 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 MAP10Q9P2G4 905 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 CLCA3PQ9Y6N3 262 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 DMXL2Q8TDJ6 3036 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
PDLIM5-220ENST00000514830 DOCK10Q96BY6 2186 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 LOC100653049A0A140TA62 436 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 TTC36A6NLP5 189 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 OR6C76A6NM76 312 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 EMC8O43402 210 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 KRT34O76011 436 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SOX30O94993 753 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 KCNH1O95259 989 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 CBX7O95931 251 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 CLPSP04118 112 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 CT62P0C5K7 136 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 ICAM2P13598 275 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 NT5EP21589 574 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 CALB2P22676 271 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 UQCRC2P22695 453 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 CDK9P50750 372 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SOX8P57073 446 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SLC26A5P58743 744 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 AP2B1P63010 937 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 PRR5P85299 388 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 C19orf57Q0VDD7 668 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 HSPB3Q12988 150 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 LTB4RQ15722 352 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 TRMT5Q32P41 509 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SOWAHCQ53LP3 525 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 EXOSC6Q5RKV6 272 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 FAM69BQ5VUD6 431 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 REP15Q6BDI9 236 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 C8orf82Q6P1X6 216 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 ZCCHC12Q6PEW1 402 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 BHLHB9Q6PI77 547 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 PAPD4Q6PIY7 484 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SLC2A7Q6PXP3 512 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 VASH2Q86V25 355 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 ANKRD46Q86W74 232 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 ARMC10Q8N2F6 343 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF615Q8N8J6 731 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 APCDD1LQ8NCL9 501 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 OR7G2Q8NG99 324 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 OR56A1Q8NGH5 318 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 OR4A15Q8NGL6 344 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 M1APQ8TC57 530 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SLC2A12Q8TD20 617 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 ZNF721Q8TF20 911 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 PPWD1Q96BP3 646 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 VMP1Q96GC9 406 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SENP5Q96HI0 755 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 NSL1Q96IY1 281 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 EPS8L2Q9H6S3 715 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 CXorf36Q9H7Y0 433 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 PNO1Q9NRX1 252 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 ARL8BQ9NVJ2 186 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 P4HTMQ9NXG6 502 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 VPS4AQ9UN37 437 aa11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 MRPS18BQ9Y676 258 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-220ENST00000514830 CPAMD8Q8IZJ3 1885 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 A0A087WV48 116 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 FXYD1O00168 92 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 UPK1AO00322 258 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 PEX12O00623 359 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 MRASO14807 208 aa11.15□□□□□ -0.62
PDLIM5-220ENST00000514830 RRP8O43159 456 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms