RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 HAO1Q9UJM8 370 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 UTS2RQ9UKP6 389 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 PSME2Q9UL46 239 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 KLF13Q9Y2Y9 288 aaPredicted RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 TRAF6Q9Y4K3 522 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 PTGDR2Q9Y5Y4 395 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 PCNX1Q96RV3 2341 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 CRYBG3Q68DQ2 2970 aa8.96□□□□□ -0.97
RNF4-221ENST00000513643 PINLYPA6NC86 204 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 ANKRD33BA6NCL7 494 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 GOLGA6L10A6NI86 522 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 A8MVJ9 347 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 TMEM233B4DJY2 109 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 SLC28A1O00337 649 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 TO15178 435 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 TM9SF1O15321 606 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 PEX1O43933 1283 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 PLOD3O60568 738 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 UQCRHP07919 91 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 IFI6P09912 130 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 CNR1P21554 472 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 GPX3P22352 226 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 FEN1P39748 380 aaKnown RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 EMDP50402 254 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 SRSF11Q05519 484 aaKnown RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 ZNF763Q0D2J5 394 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 PDE7AQ13946 482 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 MAPKAPK3Q16644 382 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.96□□□□□ -0.98
RNF4-221ENST00000513643 RFTN2Q52LD8 501 aaPredicted RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 C4orf17Q53FE4 359 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 TRMT12Q53H54 448 aaKnown RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 CEP85LQ5SZL2 805 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 IL20RBQ6UXL0 311 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 RNF111Q6ZNA4 994 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 RTL4Q6ZR62 310 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 ZCCHC23Q6ZST2 131 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 IKBIPQ70UQ0 350 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 DND1Q8IYX4 353 aaKnown RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 SAMD14Q8IZD0 417 aaPredicted RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 LRRC25Q8N386 305 aaPredicted RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 VWA5B2Q8N398 1253 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 CPSF7Q8N684 471 aaKnown RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 PRR7Q8TB68 274 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 ASB15Q8WXK1 588 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 TMEM125Q96AQ2 219 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 TLCD1Q96CP7 247 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 SPACA9Q96E40 222 aaPredicted RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 EGLN2Q96KS0 407 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 CNPPD1Q9BV87 410 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 C20orf27Q9GZN8 174 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 OR10A5Q9H207 317 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 ZDHHC11Q9H8X9 412 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 EML4Q9HC35 981 aaKnown RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 PRM3Q9NNZ6 103 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 TIMMDC1Q9NPL8 285 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 SLC35C2Q9NQQ7 365 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 HPF1Q9NWY4 346 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 C1orf109Q9NX04 203 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 ZDHHC2Q9UIJ5 367 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 DTX4Q9Y2E6 619 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 CHCHD2Q9Y6H1 151 aaPredicted RBP8.96□□□□□ -0.98
RNF4-221ENST00000513643 NOTCH2Q04721 2471 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 NAV2Q8IVL1 2488 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 ITPR2Q14571 2701 aa8.96□□□□□ -0.98
RNF4-221ENST00000513643 MYO7BQ6PIF6 2116 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 A0A0G2JMM0 328 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 C2orf92A0A1B0GVN3 265 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 A0A1W2PPB8 328 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 GNG14A0A1W2PPG7 69 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 A0A1W2PRS3 328 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 KIR3DP1A8MWS1 328 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 KLRC4-KLRK1H3BQV0 150 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 PLOD2O00469 737 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 RGS14O43566 566 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 ASNA1O43681 348 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 ERAL1O75616 437 aaKnown RBP8.95□□□□□ -0.98
RNF4-221ENST00000513643 PSMG1O95456 288 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 CCL3P10147 92 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 NEFHP12036 1026 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 NAGAP17050 411 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 DRD5P21918 477 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 DEKP35659 375 aaKnown RBP8.95□□□□□ -0.98
RNF4-221ENST00000513643 FRKP42685 505 aaPredicted RBP8.95□□□□□ -0.98
RNF4-221ENST00000513643 MEOX1P50221 254 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 WDR4P57081 412 aaKnown RBP8.95□□□□□ -0.98
RNF4-221ENST00000513643 KCNK10P57789 538 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 ALDH6A1Q02252 535 aaKnown RBP8.95□□□□□ -0.98
RNF4-221ENST00000513643 BTKQ06187 659 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 LTB4RQ15722 352 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 NTRK2Q16620 822 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 CMPK2Q5EBM0 449 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 FAM180BQ6P0A1 224 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 TMEM81Q6P7N7 255 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 SLC29A4Q7RTT9 530 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 CCDC116Q8IYX3 515 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 OR2M7Q8NG81 312 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 RNF138Q8WVD3 245 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 TWIST2Q8WVJ9 160 aa8.95□□□□□ -0.98
RNF4-221ENST00000513643 KLHL29Q96CT2 875 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms