RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 IRF7Q92985 503 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 OR2M2Q96R28 347 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 S100A13Q99584 98 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 KDELR3O43731 214 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 SLC43A1O75387 559 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 RGS9O75916 674 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 PTHP01270 115 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 KLK1P06870 262 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ARSBP15848 533 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 EDNRAP25101 427 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 MTNR1AP48039 350 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 SFRP4Q6FHJ7 346 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ENPP7Q6UWV6 458 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 WASH2PQ6VEQ5 465 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 TPRG1Q6ZUI0 275 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 FAM129CQ86XR2 697 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF248Q8NDW4 579 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 C1orf74Q96LT6 269 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF300Q96RE9 604 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 C17orf62Q9BQA9 187 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 COMMD4Q9H0A8 199 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 DUSP21Q9H596 190 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 TMEM185BQ9H7F4 350 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 FBXW2Q9UKT8 454 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 NOP16Q9Y3C1 178 aaKnown RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 EDDM13A0A1B0GTR0 161 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 M0R129 80 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 GMDSO60547 372 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 IL3P08700 152 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF14P17017 642 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 PRKCAP17252 672 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 AGTR1P30556 359 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 CTBP2P56545 445 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 TAS2R50P59544 299 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF763Q0D2J5 394 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 DBPQ10586 325 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 C22orf39Q6P5X5 142 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 CFAP77Q6ZQR2 320 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 KLBQ86Z14 1044 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 CHST4Q8NCG5 386 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ZCCHC10Q8TBK6 192 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 OVCA2Q8WZ82 227 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 BIN3Q9NQY0 253 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 GPRC5BQ9NZH0 403 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 MRTO4Q9UKD2 239 aaKnown RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 M0R036 132 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 COCHO43405 550 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 PAK4O96013 591 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ALDOBP05062 364 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ACADLP28330 430 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 KCNC1P48547 511 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 RAB2AP61019 212 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ERVK-25P63136 954 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 GRK1Q15835 563 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 METTL11BQ5VVY1 283 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 KCTD11Q693B1 232 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 PM20D1Q6GTS8 502 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 NADSYN1Q6IA69 706 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 CBLL1Q75N03 491 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 TMED4Q7Z7H5 227 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 CLECL1Q8IZS7 167 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 SYT14Q8NB59 555 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 PROKR2Q8NFJ6 384 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 GPR150Q8NGU9 434 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 OLIG1Q8TAK6 271 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 HSPA12BQ96MM6 686 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 OR10A4Q9H209 315 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ATP13A2Q9NQ11 1180 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 FBXL12Q9NXK8 326 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF639Q9UID6 485 aa10.73□□□□□ -0.69
TCOF1-211ENST00000513346 SIPA1L3O60292 1781 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 UPK3BL1B0FP48 263 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 UPK3BL2E5RIL1 263 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 F5H0A9 414 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 UBFD1O14562 309 aaKnown RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 HPGDSO60760 199 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 PRAF2O60831 178 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 GJB5O95377 273 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TNFRSF1BP20333 461 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ACVR2AP27037 513 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 CST5P28325 142 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 STXBP1P61764 594 aaKnown RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 MLLT11Q13015 90 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ELP2Q6IA86 826 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 MBOAT1Q6ZNC8 495 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 PHOSPHO2Q8TCD6 241 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 METTL21AQ8WXB1 218 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 NR4A3Q92570 626 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 SGCDQ92629 289 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RBM18Q96H35 190 aaKnown RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 HRASLS5Q96KN8 279 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TM9SF2Q99805 663 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TMEM168Q9H0V1 697 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 NMNAT1Q9HAN9 279 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 LRP5O75197 1615 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 MBLAC1A4D2B0 266 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF780AO75290 641 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RCBTB2O95199 551 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 HLA-EP13747 358 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 FOSL2P15408 326 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms