RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SCIMPQ6UWF3 145 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ZZZ3Q8IYH5 903 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 L3MBTL4Q8NA19 623 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 FAM13CQ8NE31 585 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 OR7G1Q8NGA0 311 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SPPL2AQ8TCT8 520 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SLC44A1Q8WWI5 657 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 DIO2Q92813 273 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ISL2Q96A47 359 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 NTNG2Q96CW9 530 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 DTNBP1Q96EV8 351 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SH3GL2Q99962 352 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SORBS1Q9BX66 1292 aaKnown RBP11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ERVK-6Q9BXR3 956 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 UBQLN3Q9H347 655 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
VEGFA-216ENST00000512683 CXorf21Q9HAI6 301 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 DMRT3Q9NQL9 472 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 CRIM1Q9NZV1 1036 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ADAM29Q9UKF5 820 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ERVK-19Q9WJR5 959 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 CFL2Q9Y281 166 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ANGPTL3Q9Y5C1 460 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 NPFFR2Q9Y5X5 522 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 A0A0A6YYD5 115 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 C15orf38-AP3S2A0A0A6YYH1 394 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 A0A1W2PR48 441 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 GUCY1B2O75343 617 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 SIX3O95343 332 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-216ENST00000512683 ACSL3O95573 720 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 NR2F6P10588 404 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 CTSSP25774 331 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 GDF1P27539 372 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 GCKP35557 465 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 BSGP35613 385 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 DGKQP52824 942 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 CRYZQ08257 329 aaKnown RBP11.52□□□□□ -0.57
VEGFA-216ENST00000512683 SNTA1Q13424 505 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 PRAMEF20Q5VT98 475 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 C18orf63Q68DL7 685 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 OR52E8Q6IFG1 317 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 CDC20BQ86Y33 519 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 ZPLD1Q8TCW7 415 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 TRPC4APQ8TEL6 797 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 IFT81Q8WYA0 676 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 ZNF592Q92610 1267 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 TMEM41AQ96HV5 264 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 ZFP3Q96NJ6 502 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 GAL3ST4Q96RP7 486 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 FMO2Q99518 471 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 MTERF1Q99551 399 aaKnown RBP11.52□□□□□ -0.57
VEGFA-216ENST00000512683 SERPINI1Q99574 410 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 GPATCH1Q9BRR8 931 aaKnown RBP11.52□□□□□ -0.57
VEGFA-216ENST00000512683 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.57
VEGFA-216ENST00000512683 NCKAP5O14513 1909 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 TUBAL3A6NHL2 446 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 HRKO00198 91 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 TRAPPC6AO75865 159 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 ACTL6AO96019 429 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 GFAPP14136 432 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 BMP5P22003 454 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 PIK3R1P27986 724 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 CASP3P42574 277 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 PCYT1AP49585 367 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 HNRNPH2P55795 449 aaKnown RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 RPS13P62277 151 aaKnown RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 DDX39BQ13838 428 aaKnown RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 GTF2H2Q13888 395 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 TIGD3Q6B0B8 471 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 GTF2H2CQ6P1K8 395 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 KLC3Q6P597 504 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 POMZP3Q6PJE2 187 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 DGAT2L6Q6ZPD8 337 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 NUP54Q7Z3B4 507 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 NUDT13Q86X67 352 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 RELL2Q8NC24 303 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 OR4K14Q8NGD5 310 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 DCAKDQ8WVC6 231 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 JSRP1Q96MG2 331 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 UCN2Q96RP3 112 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 PAFAH2Q99487 392 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 ZNF717Q9BY31 904 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 VPS11Q9H270 941 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 SLC6A15Q9H2J7 730 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 IPPKQ9H8X2 491 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 CPSF2Q9P2I0 782 aaKnown RBP11.51□□□□□ -0.57
VEGFA-216ENST00000512683 TMCO1Q9UM00 188 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 RNF11Q9Y3C5 154 aa11.51□□□□□ -0.57
VEGFA-216ENST00000512683 DNAJC13O75165 2243 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms