RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 OR6C76A6NM76 312 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 MSTNO14793 375 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 CLGNO14967 610 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 DYRK3O43781 588 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 TTC4O95801 387 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 CT62P0C5K7 136 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 GGT5P36269 586 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 LHX2P50458 406 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 HEPHL1Q6MZM0 1159 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 FRA10AC1Q70Z53 315 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 ADAMTSL2Q86TH1 951 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 PPIL6Q8IXY8 311 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 NKAPQ8N5F7 415 aaKnown RBP17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 TANKQ92844 425 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 RIT1Q92963 219 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 TP53INP1Q96A56 240 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 ZC3HAV1LQ96H79 300 aaKnown RBP17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 VPS39Q96JC1 886 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 SECISBP2Q96T21 854 aaKnown RBP17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 MED18Q9BUE0 208 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 EFCAB11Q9BUY7 163 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 PHACTR1Q9C0D0 580 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 OPN3Q9H1Y3 402 aaPredicted RBP17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 GALNT9Q9HCQ5 603 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 PPANQ9NQ55 473 aaKnown RBP17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 SERHLQ9NQF3 203 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 HEY2Q9UBP5 337 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 ADGRE2Q9UHX3 823 aa17.24■□□□□ 0.35
HMGCS1-206ENST00000511774 PLOD2O00469 737 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 SMNDC1O75940 238 aaKnown RBP eCLIP17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 GPR75O95800 540 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 ABCB1P08183 1280 aaPredicted RBP17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 CD79BP40259 229 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 CASP2P42575 452 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 DIO3P55073 304 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 GFRA1P56159 465 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 DMTNQ08495 405 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 CHIT1Q13231 466 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 E2F2Q14209 437 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 C10orf62Q5T681 223 aaPredicted RBP17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 OR4C11Q6IEV9 310 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 BTLAQ7Z6A9 289 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 GPR180Q86V85 440 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 ZC3HC1Q86WB0 502 aaKnown RBP17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 ZNF615Q8N8J6 731 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 SRFBP1Q8NEF9 429 aaKnown RBP17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 OR1J4Q8NGS1 313 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 RDH11Q8TC12 318 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 MS4A14Q96JA4 679 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 NODALQ96S42 347 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 KRT12Q99456 494 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 ZNF717Q9BY31 904 aaPredicted RBP17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 OR2B2Q9GZK3 357 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 SNX15Q9NRS6 342 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 ZNF226Q9NYT6 803 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 MAPRE3Q9UPY8 281 aa17.23■□□□□ 0.35
HMGCS1-206ENST00000511774 FAM95CA0A1B0GW59 222 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 RNF223E7ERA6 249 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 PLPP1O14494 284 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 OR10H2O60403 315 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 WISP3O95389 354 aaPredicted RBP17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 PLAUP00749 431 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 ABCD3P28288 659 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 UGT2B10P36537 528 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 CLDN18P56856 261 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 PCDH1Q08174 1060 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 FUT7Q11130 342 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 PDK4Q16654 411 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 TMEM35AQ53FP2 167 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 KHDRBS2Q5VWX1 349 aaKnown RBP17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 CCDC137Q6PK04 289 aaKnown RBP17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 PLEKHM3Q6ZWE6 761 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 MEIOBQ8N635 442 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 WDSUB1Q8N9V3 476 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 HGDQ93099 445 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 CFAP36Q96G28 342 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 FAM111AQ96PZ2 611 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 CXorf21Q9HAI6 301 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 ASB4Q9Y574 426 aa17.22■□□□□ 0.35
HMGCS1-206ENST00000511774 SVEP1Q4LDE5 3571 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 A0A1W2PR48 441 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 CAPN14A8MX76 684 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 B4DXG7 233 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 HCRTR2O43614 444 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 TMPRSS11DO60235 418 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 EEDO75530 441 aaKnown RBP17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 STK16O75716 305 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 THBDP07204 575 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 PCNAP12004 261 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 PCYT1AP49585 367 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 IRF8Q02556 426 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 BIKQ13323 160 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 GAB1Q13480 694 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 OR4D1Q15615 310 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 NNATQ16517 81 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 CYP1B1Q16678 543 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 DEPDC1Q5TB30 811 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 ANKRD34AQ69YU3 496 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms