RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 MCM8Q9UJA3 840 aa12.42□□□□□ -0.42
CLDND1-224ENST00000511667 SLC12A4Q9UP95 1085 aa12.42□□□□□ -0.42
CLDND1-224ENST00000511667 ERVK-11Q9UQG0 969 aa12.42□□□□□ -0.42
CLDND1-224ENST00000511667 ERVK-19Q9WJR5 959 aa12.42□□□□□ -0.42
CLDND1-224ENST00000511667 DYRK3O43781 588 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 GLRA3O75311 464 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 KRT6AP02538 564 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 KRT6BP04259 564 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 NUDT17P0C025 328 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 SSTR4P31391 388 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 RFC3P40938 356 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 KRT6CP48668 564 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 HTR6P50406 440 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 XKP51811 444 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 MAPK12P53778 367 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 DUSP2Q05923 314 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 ZNF267Q14586 743 aaPredicted RBP12.41□□□□□ -0.42
CLDND1-224ENST00000511667 CDSNQ15517 529 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 CCDC153Q494R4 210 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 SGO1Q5FBB7 561 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 XKRXQ6PP77 449 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 RNF111Q6ZNA4 994 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 FRMD7Q6ZUT3 714 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 TRIM46Q7Z4K8 759 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 GALNT12Q8IXK2 581 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 FBXW8Q8N3Y1 598 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 C1orf52Q8N6N3 182 aaKnown RBP12.41□□□□□ -0.42
CLDND1-224ENST00000511667 OR7G1Q8NGA0 311 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 RDH11Q8TC12 318 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 CCDC126Q96EE4 140 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 CNRIP1Q96F85 164 aaPredicted RBP12.41□□□□□ -0.42
CLDND1-224ENST00000511667 MAGED4Q96JG8 741 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 HBEGFQ99075 208 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 IL1RL2Q9HB29 575 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 SACM1LQ9NTJ5 587 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 NMRK1Q9NWW6 199 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 HEY2Q9UBP5 337 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 TBK1Q9UHD2 729 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 CNOT11Q9UKZ1 510 aaKnown RBP12.41□□□□□ -0.42
CLDND1-224ENST00000511667 CCL27Q9Y4X3 112 aa12.41□□□□□ -0.42
CLDND1-224ENST00000511667 ACANP16112 2415 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 A0A1B0GTH9 108 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 LRRC3CA6NJW4 275 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 H3BQF6 201 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 TFECO14948 347 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-224ENST00000511667 ZNHIT1O43257 154 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 OR10H2O60403 315 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 CDH16O75309 829 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 GUCY1B2O75343 617 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 ULK1O75385 1050 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 PORP16435 677 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-224ENST00000511667 PIK3R1P27986 724 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 FOXA1P55317 472 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 KRTAP10-9P60411 292 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 TEX35Q5T0J7 233 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 ARHGAP11AQ6P4F7 1023 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 TMEM81Q6P7N7 255 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 GK5Q6ZS86 529 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 MRGPRGQ86SM5 289 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 LRRC25Q8N386 305 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-224ENST00000511667 TMEM251Q8N6I4 163 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 METTL6Q8TCB7 284 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 SLC22A8Q8TCC7 542 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 DOK4Q8TEW6 326 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 SECISBP2Q96T21 854 aaKnown RBP12.4□□□□□ -0.42
CLDND1-224ENST00000511667 TREX2Q9BQ50 279 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-224ENST00000511667 CNPPD1Q9BV87 410 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 TNFRSF12AQ9NP84 129 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 OXSMQ9NWU1 459 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 MAT2BQ9NZL9 334 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 CNIH4Q9P003 139 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 SUCOQ9UBS9 1254 aaKnown RBP12.4□□□□□ -0.42
CLDND1-224ENST00000511667 GRID1Q9ULK0 1009 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 NINQ8N4C6 2090 aa12.4□□□□□ -0.42
CLDND1-224ENST00000511667 PHF3Q92576 2039 aaKnown RBP12.4□□□□□ -0.42
CLDND1-224ENST00000511667 NCKAP5O14513 1909 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 OR14I1A6ND48 311 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 SUSD5O60279 629 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 TRIM3O75382 744 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-224ENST00000511667 CBX7O95931 251 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 CSNK2A2P19784 350 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-224ENST00000511667 GPX3P22352 226 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 PRPH2P23942 346 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 PTGS2P35354 604 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 ARL1P40616 181 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-224ENST00000511667 GSTM5P46439 218 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 CASP6P55212 293 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 VSNL1P62760 191 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 PPIAP62937 165 aaKnown RBP12.39□□□□□ -0.43
CLDND1-224ENST00000511667 SLC22A10Q63ZE4 541 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 SLC29A4Q7RTT9 530 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 SLC22A16Q86VW1 577 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 MARVELD2Q8N4S9 558 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 OR10G3Q8NGC4 313 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 ZNF675Q8TD23 568 aa12.39□□□□□ -0.43
CLDND1-224ENST00000511667 EPS8L3Q8TE67 593 aaKnown RBP12.39□□□□□ -0.43
CLDND1-224ENST00000511667 AENQ8WTP8 325 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms