RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 HCKP08631 526 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 MPC1LP0DKB6 136 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 ADGRF1Q5T601 910 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 ZNF425Q6IV72 752 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 TMEM220Q6QAJ8 160 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 IGFN1Q86VF2 1251 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 TMEM173Q86WV6 379 aaPredicted RBP8.02□□□□□ -1.13
HTT-208ENST00000510626 MTURNQ8N3F0 131 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 ZSCAN4Q8NAM6 433 aaPredicted RBP8.02□□□□□ -1.13
HTT-208ENST00000510626 SLC5A11Q8WWX8 675 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 NSMAFQ92636 917 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 CA5BQ9Y2D0 317 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 CLCA3PQ9Y6N3 262 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 IGKV6D-41A0A0C4DH26 115 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 CD1DP15813 335 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 RAG2P55895 527 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 CRHR2Q13324 411 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 PCBP2Q15366 365 aaKnown RBP eCLIP8.02□□□□□ -1.133e-9■■■■■ 63.8
HTT-208ENST00000510626 AVPI1Q5T686 147 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 CD300LGQ6UXG3 332 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 RSC1A1Q92681 617 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 SLC25A31Q9H0C2 315 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 ARL5AQ9Y689 179 aa8.02□□□□□ -1.13
HTT-208ENST00000510626 WNT10BO00744 389 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 OR7A17O14581 309 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 KCNC1P48547 511 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 PPT1P50897 306 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 TAC4Q86UU9 113 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 SLC35F3Q8IY50 421 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 OR5H2Q8NGV7 314 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 HOXB13Q92826 284 aaPredicted RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 MFFQ9GZY8 342 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 ZNF736B4DX44 427 aaPredicted RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 CELF2O95319 508 aaKnown RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 ADRB3P13945 408 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 JUNBP17275 347 aaPredicted RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 DAOAP59103 153 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 MLLT11Q13015 90 aaPredicted RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 TATDN3Q17R31 274 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 C3orf38Q5JPI3 329 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 RASGRP3Q8IV61 690 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 GTF2H4Q92759 462 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 LRIG1Q96JA1 1093 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 DGAT2Q96PD7 388 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 SLC34A2O95436 690 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 SLAMF1Q13291 335 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 TMEM236Q5W0B7 351 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 PRKCGP05129 697 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 AHCYP23526 432 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 CA5AP35218 305 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 NUS1Q96E22 293 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 RNASE10Q5GAN6 216 aaKnown RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 FAM162BQ5T6X4 162 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 BORCS7Q96B45 105 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 SLC25A21Q9BQT8 299 aaPredicted RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 STYXL1Q9Y6J8 313 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 ATRNL1Q5VV63 1379 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 GGT3PA6NGU5 568 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 ANKRD66B4E2M5 251 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 SOCS2O14508 198 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 CSF2P04141 144 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 HRGP04196 525 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 RIN1Q13671 783 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 MICAQ29983 383 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 CNIH3Q8TBE1 160 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 BRIX1Q8TDN6 353 aaKnown RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 PTERQ96BW5 349 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 C11orf49Q9H6J7 331 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 MVB12BQ9H7P6 319 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 MMP2P08253 660 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 ARL3P36405 182 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 CAV3P56539 151 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 UGT8Q16880 541 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 SLC39A4Q6P5W5 647 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 Q6ZNX1 250 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 NRROSQ86YC3 692 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 XRN1Q8IZH2 1706 aaKnown RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 TMEM41AQ96HV5 264 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 LRR1Q96L50 414 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 MYADMQ96S97 322 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 P2RX7Q99572 595 aaKnown RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 PCDHGA7Q9Y5G6 932 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 AHSGP02765 367 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 GALP22466 123 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 TIA1P31483 386 aaKnown RBP eCLIP8.01□□□□□ -1.13
HTT-208ENST00000510626 THBS3P49746 956 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 CDK3Q00526 305 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 CDK5R2Q13319 367 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 FGFBP1Q14512 234 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 RNF141Q8WVD5 230 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 ACTRT3Q9BYD9 372 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 GSX2Q9BZM3 304 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 GPR88Q9GZN0 384 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 LRP5LA4QPB2 252 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 ARNTLO00327 626 aa8.01□□□□□ -1.13
HTT-208ENST00000510626 RNASET2O00584 256 aaKnown RBP8.01□□□□□ -1.13
HTT-208ENST00000510626 BET1O15155 118 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms