RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 PCNX1Q96RV3 2341 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 ASPDHA6ND91 283 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 LSM1O15116 133 aaKnown RBP12.53□□□□□ -0.4
SNF8-206ENST00000509989 TUBBP07437 444 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 CD46P15529 392 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 SDC1P18827 310 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 EFNA1P20827 205 aaPredicted RBP12.53□□□□□ -0.4
SNF8-206ENST00000509989 GPX3P22352 226 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 PRPH2P23942 346 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 GALNSP34059 522 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 MEOX1P50221 254 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 MAGOHP61326 146 aaKnown RBP12.53□□□□□ -0.4
SNF8-206ENST00000509989 NAA20P61599 178 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 RPL38P63173 70 aaKnown RBP12.53□□□□□ -0.4
SNF8-206ENST00000509989 CASP8Q14790 479 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 ZNF791Q3KP31 576 aaPredicted RBP12.53□□□□□ -0.4
SNF8-206ENST00000509989 GALNTL6Q49A17 601 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 ZNF628Q5EBL2 1059 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 XKR7Q5GH72 579 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 TICAM1Q8IUC6 712 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 SIAH3Q8IW03 269 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 DDIASQ8IXT1 998 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 CLYBLQ8N0X4 340 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 BCORP1Q8N888 145 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 OR8K3Q8NH51 312 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 C16orf52Q8NHV5 167 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 MGARPQ8TDB4 240 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 ASB15Q8WXK1 588 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 ADIPOR1Q96A54 375 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 CTHRC1Q96CG8 243 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 FCRL1Q96LA6 429 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 TRMOQ9BU70 441 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 OR10A5Q9H207 317 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 C1orf109Q9NX04 203 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 SENP1Q9P0U3 644 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 COPS7AQ9UBW8 275 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 ERRFI1Q9UJM3 462 aaPredicted RBP12.53□□□□□ -0.4
SNF8-206ENST00000509989 OSGIN2Q9Y236 505 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 MED12Q93074 2177 aa12.53□□□□□ -0.4
SNF8-206ENST00000509989 TMEM120BA0PK00 339 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 CYSRT1A8MQ03 144 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 A8MVJ9 347 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 NPIPA5E9PKD4 350 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 NPIPB8E9PQR5 432 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 SLC28A1O00337 649 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 AKAP10O43572 662 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 PEX1O43933 1283 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 PEX11AO75192 247 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 ATP1B1P05026 303 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 CSNK2A2P19784 350 aaPredicted RBP12.52□□□□□ -0.41
SNF8-206ENST00000509989 PIGAP37287 484 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 DNASE1L1P49184 302 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 ZNF763Q0D2J5 394 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 MAP4K2Q12851 820 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 BICRALQ6AI39 1079 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 CHERPQ8IWX8 916 aaKnown RBP12.52□□□□□ -0.41
SNF8-206ENST00000509989 ST6GALNAC3Q8NDV1 305 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 PSD4Q8NDX1 1056 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 OR7G2Q8NG99 324 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 OR52R1Q8NGF1 315 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 NUBPLQ8TB37 319 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 CIDECQ96AQ7 238 aaPredicted RBP12.52□□□□□ -0.41
SNF8-206ENST00000509989 TSSK3Q96PN8 268 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 PAIP2Q9BPZ3 127 aaKnown RBP12.52□□□□□ -0.41
SNF8-206ENST00000509989 PELOQ9BRX2 385 aaKnown RBP12.52□□□□□ -0.41
SNF8-206ENST00000509989 C1orf50Q9BV19 199 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 FAIM2Q9BWQ8 316 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 ITPAQ9BY32 194 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 NXF5Q9H1B4 397 aaKnown RBP12.52□□□□□ -0.41
SNF8-206ENST00000509989 MYNNQ9NPC7 610 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 SLC35C2Q9NQQ7 365 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 AGPAT4Q9NRZ5 378 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 PNPOQ9NVS9 261 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 HPF1Q9NWY4 346 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 BCAP29Q9UHQ4 241 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 NPIPA1Q9UND3 350 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 ERVK-11Q9UQG0 969 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 PCDHGB6Q9Y5F9 930 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 HRH3Q9Y5N1 445 aa12.52□□□□□ -0.41
SNF8-206ENST00000509989 USP9YO00507 2555 aaPredicted RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 C2orf92A0A1B0GVN3 265 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 MYO1GB0I1T2 1018 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 H3BQF6 201 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 ERLIN1O75477 346 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 UNC5CO95185 931 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 EDN3P14138 238 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 DRD2P14416 443 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 DDCP20711 480 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 EMDP50402 254 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 FBXW4P57775 412 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 ABCE1P61221 599 aaKnown RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 BST1Q10588 318 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 BIKQ13323 160 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 UBAP2LQ14157 1087 aaKnown RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 CEBPEQ15744 281 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms