RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 LRIF1Q5T3J3 769 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 UNQ6126/PRO20091Q6UXV3 157 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 SLCO4C1Q6ZQN7 724 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 LINC00696Q6ZRV3 163 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 ABHD12BQ7Z5M8 362 aaPredicted RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 ZSWIM9Q86XI8 627 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 ZDHHC21Q8IVQ6 265 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 OR4C15Q8NGM1 316 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 TCEAL2Q9H3H9 227 aaPredicted RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 ZBTB26Q9HCK0 441 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 FSCN3Q9NQT6 498 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 GRHPRQ9UBQ7 328 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 POFUT2Q9Y2G5 429 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 G3V2L1 256 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 RNASET2O00584 256 aaKnown RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 ASNA1O43681 348 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 PSMG1O95456 288 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 FGF4P08620 206 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 HK1P19367 917 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 RPS6KA3P51812 740 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 CSNK2A1P68400 391 aaPredicted RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 PLP2Q04941 152 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 PCDH1Q08174 1060 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 KPNB1Q14974 876 aaKnown RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 PAPD4Q6PIY7 484 aaKnown RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 CRIPAKQ8N1N5 446 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 ZNF619Q8N2I2 560 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 METTL4Q8N3J2 472 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 NANOS1Q8WY41 292 aaKnown RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 RAB8BQ92930 207 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 CLPTM1LQ96KA5 538 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 ATOH8Q96SQ7 321 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 MTHFD2LQ9H903 347 aaPredicted RBP4.85□□□□□ -1.63
PHF3-210ENST00000509876 KLHL1Q9NR64 748 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 NKIRAS2Q9NYR9 191 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 PACSIN3Q9UKS6 424 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 CAMK2AQ9UQM7 478 aa4.85□□□□□ -1.63
PHF3-210ENST00000509876 DOCK3Q8IZD9 2030 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 ZSWIM8A7E2V4 1837 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 CPSF4LA6NMK7 179 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 CTNSO60931 367 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 PPM1BO75688 479 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 STK17BO94768 372 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 RAP2AP10114 183 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 PNLIPP16233 465 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 YAP1P46937 504 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 CYB561P49447 251 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 FOLH1Q04609 750 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TARDBPQ13148 414 aaKnown RBP eCLIP4.84□□□□□ -1.63
PHF3-210ENST00000509876 DNASE1L3Q13609 305 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 ADRM1Q16186 407 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 MISPQ8IVT2 679 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 ENDOVQ8N8Q3 282 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 PYDC1Q8WXC3 89 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 CLDN23Q96B33 292 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 HS6ST2Q96MM7 605 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 RBP7Q96R05 134 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 MAPKAP1Q9BPZ7 522 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 GSTO2Q9H4Y5 243 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 BTNL2Q9UIR0 455 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 PILRBQ9UKJ0 227 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 PCDHGB7Q9Y5F8 929 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 DPM1O60762 260 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 EEDO75530 441 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 AIFM1O95831 613 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 MC3RP41968 323 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 HSD17B7P56937 341 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 GANABQ14697 944 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 PTGR1Q14914 329 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TMEM201Q5SNT2 666 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TCEAL6Q6IPX3 200 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 FIGNL1Q6PIW4 674 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 RINLQ6ZS11 566 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SPRED1Q7Z699 444 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 GPAT4Q86UL3 456 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SLC22A16Q86VW1 577 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 LILRA3Q8N6C8 439 aaPredicted RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 PNPLA1Q8N8W4 532 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 OR2I1PQ8NGU4 316 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TCEAL3Q969E4 200 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 RELTQ969Z4 430 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SORBS1Q9BX66 1292 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 IKZF2Q9UKS7 526 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SLC35A3Q9Y2D2 325 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 OR6C76A6NM76 312 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 NSA2O95478 260 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 PEX11BO96011 259 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SFTPCP11686 197 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 MYF5P13349 255 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 NCK1P16333 377 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 IGFBP5P24593 272 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TRAM2Q15035 370 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 IL20RBQ6UXL0 311 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 RPTNQ6XPR3 784 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TMPRSS11AQ6ZMR5 421 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SLC35F3Q8IY50 421 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 OR1J4Q8NGS1 313 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 C10orf82Q8WW14 230 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 MCHR1Q99705 422 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 MS4A8Q9BY19 250 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms