RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 LYARQ9NX58 379 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 AHSPQ9NZD4 102 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 COPS7AQ9UBW8 275 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 VTI1BQ9UEU0 232 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 SH3BGRL2Q9UJC5 107 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 ADAM29Q9UKF5 820 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 NPIPA1Q9UND3 350 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 YARS2Q9Y2Z4 477 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 PCDHGB6Q9Y5F9 930 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 PCDHA9Q9Y5H5 950 aa8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 USP9XQ93008 2570 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-213ENST00000509357 SHANK1Q9Y566 2161 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 NUP214P35658 2090 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 GOLGA8QA0A0J9YX86 632 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 GOLGA8OA6NCC3 632 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 A8MVJ9 347 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 C9JVG2 144 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 GOLGA8NF8WBI6 632 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 KLRC4-KLRK1H3BQV0 150 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 WWP2O00308 870 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 SLC28A1O00337 649 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 CRCPO75575 148 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 NEURL1O76050 574 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 LRATO95237 230 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 LDLRP01130 860 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 NR2F6P10588 404 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 BCKDHAP12694 445 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 ALOX15P16050 662 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 S1PR1P21453 382 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 MST1P26927 711 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 EPHA3P29320 983 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 IL12AP29459 219 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 MAPK12P53778 367 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 ACSM2AQ08AH3 577 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 PTGR1Q14914 329 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 LTB4RQ15722 352 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 KRTCAP3Q53RY4 240 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 SPIN4Q56A73 249 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 SPDYAQ5MJ70 313 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 ACSM2BQ68CK6 577 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF324BQ6AW86 544 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 SLC48A1Q6P1K1 146 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 C16orf47Q6ZP98 133 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 KRTCAP2Q8N6L1 136 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 OR5L2Q8NGL0 311 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 PPP1R14CQ8TAE6 165 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 ASB15Q8WXK1 588 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 TANKQ92844 425 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 GFM2Q969S9 779 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 SCMH1Q96GD3 660 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 MAGED4Q96JG8 741 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 MARK4Q96L34 752 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 MAGEB18Q96M61 343 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 C7orf26Q96N11 449 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 TSSK3Q96PN8 268 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 CNPPD1Q9BV87 410 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 LIN28AQ9H9Z2 209 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 EML4Q9HC35 981 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 TIMMDC1Q9NPL8 285 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 HPF1Q9NWY4 346 aa8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 SUCOQ9UBS9 1254 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-213ENST00000509357 SPTAN1Q13813 2472 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 USP9YO00507 2555 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 CCL21O00585 134 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 TFECO14948 347 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 PEX1O43933 1283 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 NME2P1O60361 137 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 EDF1O60869 148 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 SEC22BO75396 215 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 OR2J2O76002 312 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 IGKV3-11P04433 115 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ANXA4P09525 319 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 RNF224P0DH78 156 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 G6PDP11413 515 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ESRRAP11474 423 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF24P17028 368 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 EFNA1P20827 205 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 NME2P22392 152 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 TRHRP34981 398 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 STT3AP46977 705 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 MEOX1P50221 254 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 TDGF1P3P51864 188 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 PHC1P78364 1004 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 PLIN5Q00G26 463 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF763Q0D2J5 394 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 SF3A3Q12874 501 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 BIKQ13323 160 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 PDE7AQ13946 482 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 CEBPEQ15744 281 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 IMPG1Q17R60 797 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 IL23RQ5VWK5 629 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 HIST2H2BCQ6DN03 193 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 FAM111BQ6SJ93 734 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 IL20RBQ6UXL0 311 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
PDLIM5-213ENST00000509357 RIMKLAQ8IXN7 391 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms