RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 AIF1LQ9BQI0 150 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CAPN10Q9HC96 672 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CCM2LQ9NUG4 571 aaPredicted RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 POLG2Q9UHN1 485 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 MAN2B2Q9Y2E5 1009 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 EML5Q05BV3 1969 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 GLOD5A6NK44 160 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 MANBAO00462 879 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 SLC16A5O15375 505 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 UPK1BO75841 260 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 UBXN7O94888 489 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 UROSP10746 265 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 NUDT1P36639 197 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CASP9P55211 416 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 BNC1Q01954 994 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 SQLEQ14534 574 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PCBP2Q15366 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 KIAA1614Q5VZ46 1190 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TTC23Q5W5X9 447 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 FRG2Q64ET8 278 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PRMT9Q6P2P2 845 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 GLCCI1Q86VQ1 547 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 SVOPQ8N4V2 548 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 DTWD1Q8N5C7 304 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 AVL9Q8NBF6 648 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TOR1AIP2Q8NFQ8 470 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 HUS1BQ8NHY5 278 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 DEDD2Q8WXF8 326 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 FRG2BQ96QU4 278 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 C17orf62Q9BQA9 187 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TUBB1Q9H4B7 451 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 KIR3DX1Q9H7L2 352 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 C11orf16Q9NQ32 467 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CMTM6Q9NX76 183 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TMEM9Q9P0T7 183 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 FTSJ1Q9UET6 329 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 RNF215Q9Y6U7 377 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 MAU2Q9Y6X3 613 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 ZNF318Q5VUA4 2279 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 A0A096LPI6 279 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 LOC105371267A0A1B0GV96 52 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 LMO7DNF2Z398 122 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 ARHGAP33O14559 1287 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PLD2O14939 933 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 SH3BP5O60239 455 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 SYPP08247 313 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 C1GALT1C1LP0DN25 315 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PIM1P11309 404 aaPredicted RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CD22P20273 847 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CRHBPP24387 322 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 C21orf33P30042 268 aaPredicted RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TGM4P49221 684 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CSRP3P50461 194 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CCR8P51685 355 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 ARHGDIBP52566 201 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 RAPSNQ13702 412 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 DAG1Q14118 895 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PTGR1Q14914 329 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 PRAMEF17Q5VTA0 474 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 AGAP6Q5VW22 663 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 Q6ZPB1 254 aaPredicted RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 KRT78Q8N1N4 520 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 FAM86B1Q8N7N1 296 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 OR7G3Q8NG95 312 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 OR10A6Q8NH74 314 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 AKAP1Q92667 903 aaKnown RBP eCLIP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 CCDC74AQ96AQ1 378 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 AURKBQ96GD4 344 aaPredicted RBP8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 AGAP4Q96P64 663 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 LRFN3Q9BTN0 628 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TRMOQ9BU70 441 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 SNTG1Q9NSN8 517 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 SH3BP4Q9P0V3 963 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 C5AR2Q9P296 337 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 FBXO4Q9UKT5 387 aa8.22□□□□□ -1.09
LIMCH1-209ENST00000509277 TPRP12270 2363 aaKnown RBP8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 PCDH15Q96QU1 1955 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 SPTBN4Q9H254 2564 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 SLC1A7O00341 560 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 HAT1O14929 419 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 LCMT2O60294 686 aaKnown RBP8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 UGT2B7P16662 529 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 NDUFS1P28331 727 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 SSTR2P30874 369 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 CTSKP43235 329 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 PDZK1Q5T2W1 519 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 NXPE4Q6UWF7 544 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 ANKRD46Q86W74 232 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 FAM109AQ8N4B1 249 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 STX19Q8N4C7 294 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 C1orf52Q8N6N3 182 aaKnown RBP8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 GALNT11Q8NCW6 608 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 PIK3C3Q8NEB9 887 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 OR6Q1Q8NGQ2 317 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 OR2T11Q8NH01 316 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 OR52J3Q8NH60 311 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 PNPT1Q8TCS8 783 aaKnown RBP8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 LRRC58Q96CX6 371 aa8.21□□□□□ -1.09
LIMCH1-209ENST00000509277 NARS2Q96I59 477 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms