RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CXorf21Q9HAI6 301 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 KCNK13Q9HB14 408 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 DEPPQ9NTK1 212 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 ASF1BQ9NVP2 202 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 MAT2BQ9NZL9 334 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 VPS29Q9UBQ0 182 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF639Q9UID6 485 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 PHF11Q9UIL8 331 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 MCM8Q9UJA3 840 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 HAO1Q9UJM8 370 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 ANAPC2Q9UJX6 822 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 SNX6Q9UNH7 406 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 ACTL7BQ9Y614 415 aa6.68□□□□□ -1.34
TOPBP1-207ENST00000509162 A0A088AWK7 358 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 OR5H15A6NDH6 313 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 C17orf51A8MQB3 221 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 A8MUI8 341 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SNNO75324 88 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 OR6B1O95007 311 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 PSMG1O95456 288 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 GPR75O95800 540 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 KRT6AP02538 564 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 KRT6BP04259 564 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SERPINE1P05121 402 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 LINC00032P0C843 101 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 UROSP10746 265 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 IMPDH2P12268 514 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CPMP14384 443 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 ALOX15P16050 662 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF10P21506 573 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 TRHRP34981 398 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CD96P40200 585 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 KRT6CP48668 564 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MAPK12P53778 367 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SLC37A1P57057 533 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 TAS2R50P59544 299 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MAGOHP61326 146 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 ERVK-8P63133 956 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 RPL38P63173 70 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SKP1P63208 163 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 PHEXP78562 749 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MRPS35P82673 323 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 BTKQ06187 659 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 TGM3Q08188 693 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 C19orf57Q0VDD7 668 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 BST1Q10588 318 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MRPL49Q13405 166 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 PDE7AQ13946 482 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF169Q14929 603 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 INPP5JQ15735 1006 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 EXT1Q16394 746 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 PRICKLE4Q2TBC4 344 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 RFTN2Q52LD8 501 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CCNYL2Q5T2Q4 361 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 C10orf62Q5T681 223 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 AGAP7PQ5VUJ5 663 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CYP20A1Q6UW02 462 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 NPSR1Q6W5P4 371 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MDGA2Q7Z553 956 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 FGD2Q7Z6J4 655 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SIAH3Q8IW03 269 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 ST13P4Q8IZP2 240 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 LGI4Q8N135 537 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 GBP7Q8N8V2 638 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SRFBP1Q8NEF9 429 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 OR1N1Q8NGS0 311 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 OR9A2Q8NGT5 310 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 OR14A16Q8NHC5 309 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CLHC1Q8NHS4 586 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MGARPQ8TDB4 240 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CTHRC1Q96CG8 243 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 NTNG2Q96CW9 530 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 VMP1Q96GC9 406 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 FBXL20Q96IG2 436 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CNDP1Q96KN2 507 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 AGAP4Q96P64 663 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 RASL10BQ96S79 203 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 OR8D2Q9GZM6 311 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 CDCP1Q9H5V8 836 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 TRIM45Q9H8W5 580 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 PROK2Q9HC23 129 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SH2D2AQ9NP31 389 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MYNNQ9NPC7 610 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 PNPOQ9NVS9 261 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 DNAJB12Q9NXW2 375 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 SENP1Q9P0U3 644 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 MID2Q9UJV3 735 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 ERVK-19Q9WJR5 959 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 B3GNT3Q9Y2A9 372 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 STK38LQ9Y2H1 464 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 NCKAP5O14513 1909 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 HECTD1Q9ULT8 2610 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 DOPEY1Q5JWR5 2465 aa6.67□□□□□ -1.34
TOPBP1-207ENST00000509162 AKAP9Q99996 3911 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 CROCCQ5TZA2 2017 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 SPTAN1Q13813 2472 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ATP6AP2A0A1C7CYW4 349 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 TCP11X1B4DZS4 312 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF195O14628 629 aa6.66□□□□□ -1.34
TOPBP1-207ENST00000509162 TM9SF1O15321 606 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms