RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 PUM1Q14671 1186 aaKnown RBP eCLIP8.7□□□□□ -1.02
HTT-205ENST00000509043 ELOCQ15369 112 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 MAPK11Q15759 364 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 FAM214AQ32MH5 1076 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 DCST1Q5T197 706 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 C18orf63Q68DL7 685 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 ANKRD34AQ69YU3 496 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 ZNF770Q6IQ21 691 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 TCTN3Q6NUS6 607 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 CDC73Q6P1J9 531 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 LINC00299Q6ZSB3 139 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 SZRD1Q7Z422 152 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 B3GNT8Q7Z7M8 397 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 GKN2Q86XP6 184 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 FAM20CQ8IXL6 584 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 CCDC116Q8IYX3 515 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 OR2L13Q8N349 312 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 SMYD1Q8NB12 490 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 KCT2Q8NC54 265 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 ZNF540Q8NDQ6 660 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 C7orf57Q8NEG2 295 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 GPR32P1Q8NGA4 272 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 OR10G6Q8NH81 332 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 RHOXF1Q8NHV9 184 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 SLC37A2Q8TED4 501 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 TRUB1Q8WWH5 349 aaKnown RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 RORBQ92753 470 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 RAB8BQ92930 207 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 PRRC1Q96M27 445 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 GPR174Q9BXC1 333 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 CHRNA10Q9GZZ6 450 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 TTYH1Q9H313 450 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 NMNAT1Q9HAN9 279 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 CD93Q9NPY3 652 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 HRASLS2Q9NWW9 162 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 IMPAD1Q9NX62 359 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 KLHL28Q9NXS3 571 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 SLC13A4Q9UKG4 626 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 POMT2Q9UKY4 750 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 PNMA8BQ9ULN7 279 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 IFT52Q9Y366 437 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 PCDHGA6Q9Y5G7 932 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 LRP4O75096 1905 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 IGHV1OR15-9A0A0B4J2B8 117 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 A0A0J9YVX5 310 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 EFCAB10A6NFE3 127 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 LILRA5A6NI73 299 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 GLOD5A6NK44 160 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 METTL12A8MUP2 240 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 PTGES3LE9PB15 166 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 H0YGG7 62 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 H3BMQ9 156 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 SCAMP1O15126 338 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 PLOD3O60568 738 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 CTSVO60911 334 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 FAM20BO75063 409 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 RECKO95980 971 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 CSF2P04141 144 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 ATP1B1P05026 303 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 ALPPP05187 535 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 HTR1AP08908 422 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 CYP4B1P13584 511 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 OSMP13725 252 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 NME1P15531 152 aaKnown RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 PORP16435 677 aaPredicted RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 AGXTP21549 392 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 PCMT1P22061 227 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 FEN1P39748 380 aaKnown RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 FASLGP48023 281 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 ST13P50502 369 aaKnown RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 XKP51811 444 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 CRISP1P54107 249 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 UGT2B15P54855 530 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 ARF3P61204 181 aaPredicted RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 RACK1P63244 317 aaKnown RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 HHEXQ03014 270 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 ILKQ13418 452 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 LASP1Q14847 261 aaKnown RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 LAPTM4AQ15012 233 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 TCEA2Q15560 299 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 GPR19Q15760 415 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 NPTX1Q15818 432 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 SYPL1Q16563 259 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 EIPR1Q53HC9 387 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 RPS26P11Q5JNZ5 115 aaPredicted RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 SYT6Q5T7P8 510 aaPredicted RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 GPR107Q5VW38 600 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 AP1ARQ63HQ0 302 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 HEPHL1Q6MZM0 1159 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 MFSD12Q6NUT3 480 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 GPR153Q6NV75 609 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 TMEM107Q6UX40 140 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 C16orf62Q7Z3J2 963 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 ANKRD13BQ86YJ7 626 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 SLC44A2Q8IWA5 706 aaPredicted RBP8.69□□□□□ -1.02
HTT-205ENST00000509043 ENTHD1Q8IYW4 607 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 CARFQ8N187 725 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 CSNK1A1LQ8N752 337 aa8.69□□□□□ -1.02
HTT-205ENST00000509043 AQP11Q8NBQ7 271 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms