RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 FRG2BQ96QU4 278 aa16.41■□□□□ 0.22
SKP2-204ENST00000508514 SERPINI1Q99574 410 aa16.41■□□□□ 0.22
SKP2-204ENST00000508514 ANGPTL4Q9BY76 406 aa16.41■□□□□ 0.22
SKP2-204ENST00000508514 OR10A5Q9H207 317 aa16.41■□□□□ 0.22
SKP2-204ENST00000508514 LIME1Q9H400 295 aa16.41■□□□□ 0.22
SKP2-204ENST00000508514 FREM3P0C091 2139 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 NF1P21359 2839 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 SYT5O00445 386 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 GDF1P27539 372 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 PIK3R1P27986 724 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 CEACAM8P31997 349 aaPredicted RBP16.4■□□□□ 0.22
SKP2-204ENST00000508514 CASP3P42574 277 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 XKP51811 444 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 DUSP2Q05923 314 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 RPS6KA2Q15349 733 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 ACSF3Q4G176 576 aaPredicted RBP16.4■□□□□ 0.22
SKP2-204ENST00000508514 KLC3Q6P597 504 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 RELL1Q8IUW5 271 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 GALNT12Q8IXK2 581 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 PRR22Q8IZ63 422 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 TAGAPQ8N103 731 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 OR4K14Q8NGD5 310 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 RILPQ96NA2 401 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 SH3GL2Q99962 352 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 WDR41Q9HAD4 459 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 ZNF225Q9UK10 706 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 IKBKGQ9Y6K9 419 aa16.4■□□□□ 0.22
SKP2-204ENST00000508514 KIAA1549Q9HCM3 1950 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 FAM221AA4D161 298 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 STX16-NPEPL1H3BU86 382 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 STX16O14662 325 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 EPPINO95925 133 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 HPNP05981 417 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 ABCB1P08183 1280 aaPredicted RBP16.39■□□□□ 0.21
SKP2-204ENST00000508514 CPMP14384 443 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 GPX3P22352 226 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 CDK9P50750 372 aaKnown RBP16.39■□□□□ 0.21
SKP2-204ENST00000508514 CCNG1P51959 295 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 ART1P52961 327 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 IST1P53990 364 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 GALNT1Q10472 559 aaPredicted RBP16.39■□□□□ 0.21
SKP2-204ENST00000508514 SGO1Q5FBB7 561 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 DCST1Q5T197 706 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 TMEM198Q66K66 360 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 FAM111BQ6SJ93 734 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 ZZZ3Q8IYH5 903 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 METTL4Q8N3J2 472 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 OR4F6Q8NGB9 312 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 ZNF597Q96LX8 424 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 NXF5Q9H1B4 397 aaKnown RBP16.39■□□□□ 0.21
SKP2-204ENST00000508514 RYDENQ9NUL5 291 aaKnown RBP16.39■□□□□ 0.21
SKP2-204ENST00000508514 XPR1Q9UBH6 696 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 ZNF639Q9UID6 485 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 ADAM29Q9UKF5 820 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 SLC6A5Q9Y345 797 aa16.39■□□□□ 0.21
SKP2-204ENST00000508514 C15orf38-AP3S2A0A0A6YYH1 394 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 AHRRA9YTQ3 701 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 RPS17P08708 135 aaKnown RBP16.38■□□□□ 0.21
SKP2-204ENST00000508514 RBP1P09455 135 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 TSPAN8P19075 237 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 ABCD3P28288 659 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 PTGDSP41222 190 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 PRICKLE4Q2TBC4 344 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 EIPR1Q53HC9 387 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 TBCELQ5QJ74 424 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 CCNYL2Q5T2Q4 361 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 VASNQ6EMK4 673 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 LETMD1Q6P1Q0 360 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 COMMD6Q7Z4G1 85 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 ATP6V1E2Q96A05 226 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 TM4SF18Q96CE8 201 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 SECISBP2Q96T21 854 aaKnown RBP16.38■□□□□ 0.21
SKP2-204ENST00000508514 PRDM14Q9GZV8 571 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 CDC42EP4Q9H3Q1 356 aaKnown RBP16.38■□□□□ 0.21
SKP2-204ENST00000508514 CRIM1Q9NZV1 1036 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 B4GALT7Q9UBV7 327 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 DMGDHQ9UI17 866 aaKnown RBP16.38■□□□□ 0.21
SKP2-204ENST00000508514 C15orf41Q9Y2V0 281 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 PCDHA9Q9Y5H5 950 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 PRRC2AP48634 2157 aaKnown RBP16.38■□□□□ 0.21
SKP2-204ENST00000508514 ARHGAP21Q5T5U3 1957 aa16.38■□□□□ 0.21
SKP2-204ENST00000508514 HRNRQ86YZ3 2850 aaPredicted RBP16.37■□□□□ 0.21
SKP2-204ENST00000508514 ITPR3Q14573 2671 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 HSPB2A8KAH6 182 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 TP53I11O14683 189 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 TRAPPC6AO75865 159 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 SNX4O95219 450 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 ZWINTO95229 277 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 PDYNP01213 254 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 PORP16435 677 aaPredicted RBP16.37■□□□□ 0.21
SKP2-204ENST00000508514 BMP7P18075 431 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 NT5EP21589 574 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 ECHS1P30084 290 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 ZNF136P52737 540 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 CDH13P55290 713 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 MAP4K2Q12851 820 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 EXOSC7Q15024 291 aaKnown RBP16.37■□□□□ 0.21
SKP2-204ENST00000508514 HSPB2Q16082 182 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 NNATQ16517 81 aa16.37■□□□□ 0.21
SKP2-204ENST00000508514 GGTA1PQ4G0N0 100 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms