RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 C1QAP02745 245 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 PIM1P11309 404 aaPredicted RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 CCKARP32238 428 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 HSPA7P48741 367 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 ALDH9A1P49189 494 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 AGTR2P50052 363 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CCR8P51685 355 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 PGDP52209 483 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 EMP2P54851 167 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 MLLT10P55197 1068 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 TBPL1P62380 186 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 ABATP80404 500 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CAV1Q03135 178 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 TLE1Q04724 770 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CKAP4Q07065 602 aaKnown RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 KLC1Q07866 573 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 Q0VFX4 171 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 DLG1Q12959 904 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CSHL1Q14406 222 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 RBBP5Q15291 538 aaKnown RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 WHAMMP3Q1A5X7 153 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 NADK2Q4G0N4 442 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 GRTP1Q5TC63 336 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CAPN13Q6MZZ7 669 aaPredicted RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 C8orf74Q6P047 294 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 PGM2L1Q6PCE3 622 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 KIRREL2Q6UWL6 708 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 RAPH1Q70E73 1250 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 RNF44Q7L0R7 432 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 VN1R4Q7Z5H5 301 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CMC1Q7Z7K0 106 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 GALNT7Q86SF2 657 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 THOC6Q86W42 341 aaKnown RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 PDSS2Q86YH6 399 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 GPSM1Q86YR5 675 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 RAB43Q86YS6 212 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 APLFQ8IW19 511 aaPredicted RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 MMGT1Q8N4V1 131 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 NKAPQ8N5F7 415 aaKnown RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 AMER3Q8N944 861 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 TEX19Q8NA77 164 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 OR4K1Q8NGD4 311 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 OR56A3Q8NH54 315 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 ZCCHC10Q8TBK6 192 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 STT3BQ8TCJ2 826 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 SLC13A3Q8WWT9 602 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 EXT2Q93063 718 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 NEIL2Q969S2 332 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 FBXL8Q96CD0 374 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 NXNL1Q96CM4 212 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 TRIB1Q96RU8 372 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CPNE1Q99829 537 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 EGFL8Q99944 293 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CRB3Q9BUF7 120 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 NUDT9Q9BW91 350 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 ADNPQ9H2P0 1102 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 SPNS1Q9H2V7 528 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 RHBGQ9H310 441 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 KLHL31Q9H511 634 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 ALG9Q9H6U8 611 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 MKS1Q9NXB0 559 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 NINJ2Q9NZG7 142 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 HCN3Q9P1Z3 774 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 C3orf18Q9UK00 162 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 CORO1CQ9ULV4 474 aaPredicted RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 SLC22A14Q9Y267 594 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 PADI2Q9Y2J8 665 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 HS3ST3B1Q9Y662 390 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 SCN3AQ9NY46 2000 aa4.27□□□□□ -1.73
NUP54-206ENST00000508465 TNRC6AQ8NDV7 1962 aaKnown RBP4.27□□□□□ -1.73
NUP54-206ENST00000508465 COL6A6A6NMZ7 2263 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 BAHCC1Q9P281 2608 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 TLN1Q9Y490 2541 aaKnown RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 KCNE1BA0A087WTH5 132 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 IGHV3-20A0A0C4DH32 117 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 A0A0G2JN53 185 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 TRBC2A0A5B9 178 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 LRRC14BA6NHZ5 514 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 VSTM2BA6NLU5 285 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 FOXO6A8MYZ6 492 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 IDSB3KWA1 339 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 POC1B-GALNT4F8VUJ3 575 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 UBXN8O00124 270 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 SOCS6O14544 535 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 NDC80O14777 642 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CLGNO14967 610 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 SH3BGRLO75368 114 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RDH16O75452 317 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 WDR47O94967 919 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 WISP3O95389 354 aaPredicted RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 BMP10O95393 424 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 IL33O95760 270 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 F10P00742 488 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 HEXBP07686 556 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ANXA5P08758 320 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 GSTA2P09210 222 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 SBK3P0C264 359 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RHOXF2BP0C7M4 288 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CTAGE8P0CG41 777 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms