RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 CNPPD1Q9BV87 410 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 NUDT9Q9BW91 350 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 OR8D2Q9GZM6 311 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 ING2Q9H160 280 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 PRORYQ9H606 182 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 MMP25Q9NPA2 562 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 SAR1AQ9NR31 198 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 TMEM45AQ9NWC5 275 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 ZNF639Q9UID6 485 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 ZNF223Q9UK11 482 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 ERVK-19Q9WJR5 959 aa12.54□□□□□ -0.4
UBE2D3-221ENST00000507845 EPG5Q9HCE0 2579 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 A0A1W2PRB8 838 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 RNASET2O00584 256 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 CLPSP04118 112 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 IL6P05231 212 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 PGRP06401 933 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 ITGAMP11215 1152 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 ICAM2P13598 275 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 CD1EP15812 388 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 SSTR4P31391 388 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 CDK9P50750 372 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 MANFP55145 182 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 SOX8P57073 446 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 MRPS35P82673 323 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 FUT7Q11130 342 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 HSPB3Q12988 150 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 RCAN2Q14206 197 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 AGKQ53H12 422 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 TRMT12Q53H54 448 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 FHL5Q5TD97 284 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 C6orf163Q5TEZ5 329 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 BLOC1S3Q6QNY0 202 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 MTERF4Q7Z6M4 381 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 KBTBD2Q8IY47 623 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 VWA5B2Q8N398 1253 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 KIF2BQ8N4N8 673 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 OR7G2Q8NG99 324 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 ELP5Q8TE02 316 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 OR5P2Q8WZ92 322 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 NMUR2Q9GZQ4 415 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 FAM120CQ9NX05 1096 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 CCDC167Q9P0B6 97 aa12.53□□□□□ -0.4
UBE2D3-221ENST00000507845 TNRC6AQ8NDV7 1962 aaKnown RBP12.52□□□□□ -0.4
UBE2D3-221ENST00000507845 TRBV11-1A0A0K0K1C0 115 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 PRSS51A0A1B0GVH4 220 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 PLOD2O00469 737 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 FCHO1O14526 889 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 PLOD3O60568 738 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 DNAJB5O75953 348 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 SLITRK5O94991 958 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 C6orf47O95873 294 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 CBX7O95931 251 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 IFI6P09912 130 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 MC3RP41968 323 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 SLC37A1P57057 533 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 AP2B1P63010 937 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 DUSP8Q13202 625 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 UBAP2LQ14157 1087 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 EXOSC7Q15024 291 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 TBR1Q16650 682 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 TIGD2Q4W5G0 525 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ANXA8L1Q5VT79 327 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 BORAQ6PGQ7 559 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 C19orf48Q6RUI8 117 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 TMEM107Q6UX40 140 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ANKRD46Q86W74 232 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 CLECL1Q8IZS7 167 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 GALNT16Q8N428 558 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ZNF615Q8N8J6 731 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 SIMC1Q8NDZ2 872 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 OR7G1Q8NGA0 311 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 PSMA8Q8TAA3 256 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 APOBEC4Q8WW27 367 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ERP27Q96DN0 273 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ELP4Q96EB1 424 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 THOC3Q96J01 351 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 OR52E6Q96RD3 313 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 TRIM4Q9C037 500 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 LHPPQ9H008 270 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ANKRA2Q9H9E1 313 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 SLC52A3Q9NQ40 469 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 SIRT3Q9NTG7 399 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 MRGBPQ9NV56 204 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 COPS7AQ9UBW8 275 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ERVK-11Q9UQG0 969 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 CNTRLQ7Z7A1 2325 aa12.52□□□□□ -0.41
UBE2D3-221ENST00000507845 EXPH5Q8NEV8 1989 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 A0A087WV62 115 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 NR5A2O00482 541 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 CFLARO15519 480 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 PRKNO60260 465 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 CCDC22O60826 627 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 CEACAM4O75871 244 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 ITGB2P05107 769 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 ITGA3P26006 1051 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 GPC1P35052 558 aa12.51□□□□□ -0.41
UBE2D3-221ENST00000507845 CCL11P51671 97 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms