RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 HLCSP50747 726 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 MLLT10P55197 1068 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ERVK-8P63133 956 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 RNF4P78317 190 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 TLE1Q04724 770 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 TUBA3CQ13748 450 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 INPP5JQ15735 1006 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 GALNTL6Q49A17 601 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ATP6AP1LQ52LC2 224 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 RFTN2Q52LD8 501 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 COLEC12Q5KU26 742 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 RNFT1Q5M7Z0 435 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 FAM219BQ5XKK7 198 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 FAM71E1Q6IPT2 247 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 TUBA3EQ6PEY2 450 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 RNF111Q6ZNA4 994 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 IKBIPQ70UQ0 350 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 SLC29A4Q7RTT9 530 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 GALNT12Q8IXK2 581 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 GPALPP1Q8IXQ4 340 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ARMC10Q8N2F6 343 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 CISD2Q8N5K1 135 aaKnown RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 Q8NA96 180 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 OR7G1Q8NGA0 311 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 CDC26Q8NHZ8 85 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 RAB3IL1Q8TBN0 382 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 CPT1CQ8TCG5 803 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ZNF721Q8TF20 911 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 THAP3Q8WTV1 239 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 TMEM125Q96AQ2 219 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ARL8AQ96BM9 186 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 C5orf34Q96MH7 638 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 BBS4Q96RK4 519 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 CNPPD1Q9BV87 410 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 EPN3Q9H201 632 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 MANSC1Q9H8J5 431 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 CXorf21Q9HAI6 301 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 MIEF1Q9NQG6 463 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 SLC35C2Q9NQQ7 365 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 AGPAT4Q9NRZ5 378 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 THAP1Q9NVV9 213 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ANKRD10Q9NXR5 420 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 LUZP4Q9P127 313 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 LRFN1Q9P244 771 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 MYOTQ9UBF9 498 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 HEY2Q9UBP5 337 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 VPS4AQ9UN37 437 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ERVK-19Q9WJR5 959 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ENTPD4Q9Y227 616 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 EIF3LQ9Y262 564 aaKnown RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 CFL2Q9Y281 166 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 POLR3HQ9Y535 204 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 PCDHGB6Q9Y5F9 930 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 CCDC88CQ9P219 2028 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 PIEZO2Q9H5I5 2752 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 C2orf92A0A1B0GVN3 265 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 ATP6AP2A0A1C7CYW4 349 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 CAPN14A8MX76 684 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 TMEM233B4DJY2 109 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SLCO1B7G3V0H7 640 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 J3QKU1 62 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 WWP2O00308 870 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SKAP2O75563 359 aaPredicted RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 ATP6AP2O75787 350 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 BCAS2O75934 225 aaPredicted RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 OR2J2O76002 312 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SORBS2O94875 1100 aaKnown RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 RASAL1O95294 804 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 IGKV3-11P04433 115 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 ATP1B1P05026 303 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SP1P08047 785 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 PRPS2P11908 318 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 PLA2G2AP14555 144 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 RPL3P39023 403 aaKnown RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 ASMTP46597 345 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SSR4P51571 173 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 RPL38P63173 70 aaKnown RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 BST1Q10588 318 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 MAP4K2Q12851 820 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 MAD2L1Q13257 205 aaPredicted RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 OR1C1Q15619 314 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 INAQ16352 499 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 MPEG1Q2M385 716 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SMU1Q2TAY7 513 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 ZNF766Q5HY98 468 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 HLA-DQA1Q5Y7H0 255 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SPINK14Q6IE38 97 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SLC25A25Q6KCM7 469 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 OPN5Q6U736 354 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 DGAT2L6Q6ZPD8 337 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 R3HCC1LQ7Z5L2 792 aaKnown RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 TICAM1Q8IUC6 712 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 MMP21Q8N119 569 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 LRRC25Q8N386 305 aaPredicted RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 SLC15A4Q8N697 577 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 ZNF781Q8N8C0 355 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 ZNF321PQ8N8H1 164 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 FNDC5Q8NAU1 212 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 TMEM178AQ8NBL3 297 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 FAM98AQ8NCA5 519 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms