RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ROGDIQ9GZN7 287 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 PRDM14Q9GZV8 571 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 KCNF1Q9H3M0 494 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 PLEKHF2Q9H8W4 249 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 TEX10Q9NXF1 929 aaPredicted RBP5.35□□□□□ -1.55
GYPB-205ENST00000505583 CNIH4Q9P003 139 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 B4GALT7Q9UBV7 327 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 RNF112Q9ULX5 631 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 DTX4Q9Y2E6 619 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 PCDHGB3Q9Y5G1 929 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 MAP1AP78559 2803 aaPredicted RBP5.35□□□□□ -1.55
GYPB-205ENST00000505583 NIPBLQ6KC79 2804 aaeCLIP5.35□□□□□ -1.55
GYPB-205ENST00000505583 MED12LQ86YW9 2145 aa5.35□□□□□ -1.55
GYPB-205ENST00000505583 ANKHD1Q8IWZ3 2542 aaKnown RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 NAV3Q8IVL0 2385 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 ABCA4P78363 2273 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 IQANK1A0A1B0GTG1 560 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 C2orf92A0A1B0GVN3 265 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 HMX2A2RU54 273 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 SYNDIG1LA6NDD5 238 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 TUBAL3A6NHL2 446 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 AHRRA9YTQ3 701 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 B4DXG7 233 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 SUPT3HB4E1H0 165 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 K7EPI3 171 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 DVL2O14641 736 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 GNB5O14775 395 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 OR10H2O60403 315 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 KERAO60938 352 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NME6O75414 186 aaPredicted RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 SUPT3HO75486 399 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 SIX3O95343 332 aaPredicted RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 RAF1P04049 648 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 HPNP05981 417 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 FAM58BPP0C7Q3 252 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NR2F6P10588 404 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 EPXP11678 715 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 DRD2P14416 443 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 TCP1P17987 556 aaKnown RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 S1PR1P21453 382 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 SERPINB3P29508 390 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 HOXC12P31275 282 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 GP5P40197 560 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 PIK3CBP42338 1070 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 CASP3P42574 277 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 CDK9P50750 372 aaKnown RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 DUSP2Q05923 314 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 LTBQ06643 244 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 PCDH1Q08174 1060 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 LAPTM4AQ15012 233 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 RPS6KA2Q15349 733 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NNATQ16517 81 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 CPSF6Q16630 551 aaKnown RBP eCLIP5.34□□□□□ -1.55
GYPB-205ENST00000505583 HIST2H2ACQ16777 129 aaPredicted RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 DEFB113Q30KQ7 82 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 KBTBD12Q3ZCT8 623 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NSUN5P2Q63ZY6 315 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 HIST2H2AA3Q6FI13 130 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 GRHL2Q6ISB3 625 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 SLC29A4Q7RTT9 530 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 YRDCQ86U90 279 aaKnown RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 MYLK4Q86YV6 388 aaPredicted RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 LACC1Q8IV20 430 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 CENPLQ8N0S6 344 aaPredicted RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 CIARTQ8N365 385 aaPredicted RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 VWA5B2Q8N398 1253 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 LIX1Q8N485 282 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 MEIOBQ8N635 442 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 TEX9Q8N6V9 391 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 C9orf106Q8NAJ2 232 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 PYROXD1Q8WU10 500 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 UBTD2Q8WUN7 234 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 KCTD4Q8WVF5 259 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 SLC44A1Q8WWI5 657 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 ADIPOR1Q96A54 375 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 RGMAQ96B86 450 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NXNL1Q96CM4 212 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 TSPAN17Q96FV3 270 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 ZNF597Q96LX8 424 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 RILPQ96NA2 401 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 TRIB1Q96RU8 372 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 CPNE1Q99829 537 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 G6PC3Q9BUM1 346 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 ANGPTL4Q9BY76 406 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 DPH5Q9H2P9 285 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 DDX31Q9H8H2 851 aaKnown RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 CXorf21Q9HAI6 301 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NEUROD4Q9HD90 331 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 SAYSD1Q9NPB0 183 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 QPCTLQ9NXS2 382 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NSMCE4AQ9NXX6 385 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 GRHL1Q9NZI5 618 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 NUDT4Q9NZJ9 180 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 JKAMPQ9P055 326 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 OPTCQ9UBM4 332 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 ZNF629Q9UEG4 869 aaPredicted RBP5.34□□□□□ -1.55
GYPB-205ENST00000505583 PHF11Q9UIL8 331 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 CAMK2AQ9UQM7 478 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 C15orf41Q9Y2V0 281 aa5.34□□□□□ -1.55
GYPB-205ENST00000505583 RNF11Q9Y3C5 154 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms