RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 BCAS1O75363 584 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 PPP1R3DO95685 299 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CLPTM1O96005 669 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 GOT2P00505 430 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CHRNA1P02708 482 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 TSPAN8P19075 237 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CCNCP24863 283 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 GPR183P32249 361 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CA8P35219 290 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 SOX3P41225 446 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CEBPDP49716 269 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 PPT1P50897 306 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 SGSHP51688 502 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 AIF1P55008 147 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 VCPP55072 806 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 OSTNP61366 133 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 BTG1P62324 171 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 NAAAQ02083 359 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 TNFRSF17Q02223 184 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CNTN2Q02246 1040 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 SELPLGQ14242 412 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 HKDC1Q2TB90 917 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 KIAA1644Q3SXP7 199 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 KCTD21Q4G0X4 260 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 RABGAP1LQ5R372 815 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF730Q6ZMV8 503 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CHMP1BQ7LBR1 199 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 GPR142Q7Z601 462 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 EFCAB13Q8IY85 973 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 PYROXD2Q8N2H3 581 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CENPSQ8N2Z9 138 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 DCLK2Q8N568 766 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 ARFGAP2Q8N6H7 521 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 BHLHE23Q8NDY6 225 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR5M9Q8NGP3 310 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 RAET1EQ8TD07 263 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZPBPQ9BS86 351 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 EDEM2Q9BV94 578 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CXXC4Q9H2H0 198 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 ATP13A3Q9H7F0 1226 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CALHM2Q9HA72 323 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 FZR1Q9UM11 496 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CLEC4AQ9UMR7 237 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 RNF6Q9Y252 685 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 NAALAD2Q9Y3Q0 740 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZHX2Q9Y6X8 837 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 MYH14Q7Z406 1995 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 LOC105371242A0A075B767 164 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 MSGN1A6NI15 193 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 WASHC1A8K0Z3 465 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 TMCO5BA8MYB1 307 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 NPIPA2E9PIF3 369 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 PRRG1O14668 218 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 ALOX15BO15296 676 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 SNNO75324 88 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 LRCH4O75427 683 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 CDC123O75794 336 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 CALCAP01258 141 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 IL1BP01584 269 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 GSTT2P0CG29 244 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 GSTT2BP0CG30 244 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 CYP11B1P15538 503 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 AMD1P17707 334 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 PAX7P23759 505 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 NOP14P78316 857 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 CCNA1P78396 465 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 IL9RQ01113 521 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 RIGQ13278 110 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 EXOC3L2Q2M3D2 409 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF699Q32M78 642 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 GTDC1Q4AE62 458 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 TTC23Q5W5X9 447 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 STEAP1BQ6NZ63 245 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 GDPD4Q6W3E5 623 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 SH2D5Q6ZV89 423 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 EFL1Q7Z2Z2 1120 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 NET1Q7Z628 596 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF843Q8N446 348 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 KBTBD3Q8NAB2 608 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 KLHDC9Q8NEP7 349 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR5AU1Q8NGC0 362 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR5AP2Q8NGF4 316 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR6F1Q8NGZ6 308 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR2T11Q8NH01 316 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 FBXO25Q8TCJ0 367 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 MAPK15Q8TD08 544 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 ATP8B4Q8TF62 1192 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 SPRYD4Q8WW59 207 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 OSTF1Q92882 214 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 FBXO32Q969P5 355 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC41A3Q96GZ6 507 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 AKR1E2Q96JD6 320 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 CNOT6LQ96LI5 555 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 C2orf48Q96LS8 159 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 ANKRD27Q96NW4 1050 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 CASD1Q96PB1 797 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 TESK2Q96S53 571 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 PINK1Q9BXM7 581 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms