RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SLC12A2P55011 1212 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 HNRNPH2P55795 449 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 SLC37A1P57057 533 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 SIRPAP78324 504 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 RPP38P78345 283 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 IGLV3-21P80748 117 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 TNFRSF17Q02223 184 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 CHIT1Q13231 466 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 VEZF1Q14119 521 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 SETDB1Q15047 1291 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PPP1R7Q15435 360 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 TGFBIQ15582 683 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 HIST2H2ACQ16777 129 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 NHSL2Q5HYW2 709 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 C10orf62Q5T681 223 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 RNASEH2BQ5TBB1 312 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 HIST2H2AA3Q6FI13 130 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 ENPP6Q6UWR7 440 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 C20orf204Q6ZNR8 217 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 P4HA3Q7Z4N8 544 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 GPR180Q86V85 440 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 MYLK4Q86YV6 388 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 IGDCC3Q8IVU1 814 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 ST13P4Q8IZP2 240 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 OR1J4Q8NGS1 313 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 ZNF473Q8WTR7 871 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PDLIM5Q96HC4 596 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 MS4A14Q96JA4 679 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PELOQ9BRX2 385 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 CAPS2Q9BXY5 557 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 ANGPTL4Q9BY76 406 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PITHD1Q9GZP4 211 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 OR51B5Q9H339 312 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 ACBD3Q9H3P7 528 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PIGMQ9H3S5 423 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 EHD1Q9H4M9 534 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 CNOT10Q9H9A5 744 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 SNX15Q9NRS6 342 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 ASIC3Q9UHC3 531 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PHF11Q9UIL8 331 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PSAT1Q9Y617 370 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 HRNRQ86YZ3 2850 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 TLN2Q9Y4G6 2542 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 A0A1W2PNV4 684 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 OR6C76A6NM76 312 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 STK16O75716 305 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 SCELO95171 688 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 RCBTB2O95199 551 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 TGM6O95932 706 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 ACTL6AO96019 429 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 CLPSP04118 112 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 S100BP04271 92 aaPredicted RBP6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 NR2F6P10588 404 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 POU2F1P14859 743 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 EPB42P16452 691 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 NT5EP21589 574 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 CNTFP26441 200 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 CCKARP32238 428 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 BUD31P41223 144 aaPredicted RBP6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 ELK3P41970 407 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 KCNJ5P48544 419 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 ATP5J2P56134 94 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 NRG3P56975 720 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 RPS13P62277 151 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 KRTAP1-1Q07627 177 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 PCDH1Q08174 1060 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 GAB1Q13480 694 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 LAPTM5Q13571 262 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 LAPTM4AQ15012 233 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 SPRED3Q2MJR0 410 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 TMEM35AQ53FP2 167 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 KHDRBS2Q5VWX1 349 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 ANKRD34AQ69YU3 496 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 TIGD3Q6B0B8 471 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 OR4C11Q6IEV9 310 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 MED27Q6P2C8 311 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 VWA1Q6PCB0 445 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 GALNT7Q86SF2 657 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 ZC3HC1Q86WB0 502 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 GPSM1Q86YR5 675 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 TRIM42Q8IWZ5 723 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 GALNT12Q8IXK2 581 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 UBQLNLQ8IYU4 475 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 TCAIMQ8N3R3 496 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 C7orf57Q8NEG2 295 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 ZPLD1Q8TCW7 415 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 TMEM171Q8WVE6 324 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 UCN3Q969E3 161 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 NTNG2Q96CW9 530 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 TMEM41AQ96HV5 264 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 SFXN2Q96NB2 322 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 ZFP3Q96NJ6 502 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 SECISBP2Q96T21 854 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 NAT9Q9BTE0 207 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 OSBPL11Q9BXB4 747 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 GSX2Q9BZM3 304 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 OPN3Q9H1Y3 402 aaPredicted RBP6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 PLAC1Q9HBJ0 212 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 GALNT9Q9HCQ5 603 aa6.26□□□□□ -1.41
NPIPB3-203ENST00000504841 MS4A12Q9NXJ0 267 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms