RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TMEM25Q86YD3 366 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 CD200R1Q8TD46 325 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 STRADBQ9C0K7 418 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 VNN3Q9NY84 501 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 PADI2Q9Y2J8 665 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 MAN2B1O00754 1011 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 CNMDO75829 334 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 RGS9O75916 674 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 APOL3O95236 402 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 SYNGR4O95473 234 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 RETP07949 1114 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 CCNOP22674 350 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 FRKP42685 505 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 NFE2L1Q14494 772 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 TCEAL8Q8IYN2 117 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 RHBDF1Q96CC6 855 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 TGM7Q96PF1 710 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 GPR174Q9BXC1 333 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 ZNF700Q9H0M5 742 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 APOBEC3BQ9UH17 382 aaKnown RBP15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 JMJD7P0C870 316 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 GKN3PP0CG01 181 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 PRSS56P0CW18 603 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 PRKCAP17252 672 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 ETV4P43268 484 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 MAP2K3P46734 347 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 UGT8Q16880 541 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 FAM76BQ5HYJ3 339 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 TMEM69Q5SWH9 247 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 C22orf42Q6IC83 251 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC39A5Q6ZMH5 540 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 TMPRSS9Q7Z410 1059 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 ZBTB8BQ8NAP8 495 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 GSTO2Q9H4Y5 243 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 BRF2Q9HAW0 419 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 RXFP3Q9NSD7 469 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 IL17CQ9P0M4 197 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 PPP4R1LQ9P1A2 415 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 NUP50Q9UKX7 468 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 WASH4PA8MWX3 477 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 ADORA3P0DMS8 318 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC25A25Q6KCM7 469 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 Q8N402 240 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 OR8S1Q8NH09 359 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 WDR77Q9BQA1 342 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 ZNF471Q9BX82 626 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 PLD2O14939 933 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 RFPL2O75678 378 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC16A8O95907 504 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 BMPR1AP36894 532 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 PLEKHN1Q494U1 663 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 MORN1Q5T089 497 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 ELP5Q8TE02 316 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 GATAD2BQ8WXI9 593 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 NELL2Q99435 816 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 CNN2Q99439 309 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 SLC17A9Q9BYT1 436 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 MTHFD2LQ9H903 347 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 EPHA6Q9UF33 1036 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 GRXCR2A6NFK2 248 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 OR2B3O76000 313 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 RBMXP38159 391 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 C1orf61Q13536 156 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 CASTOR1Q8WTX7 329 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 KIAA1143Q96AT1 154 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 APIPQ96GX9 242 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 ACTR6Q9GZN1 396 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 WDR37Q9Y2I8 494 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 ENPP4Q9Y6X5 453 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 PLCH1Q4KWH8 1693 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 VNN2O95498 520 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 PET100P0DJ07 73 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 CAPN3P20807 821 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 TBRG1Q3YBR2 411 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 ZNF584Q8IVC4 421 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 CHST14Q8NCH0 376 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 OR5T2Q8NGG2 359 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 TRUB1Q8WWH5 349 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 PTERQ96BW5 349 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 IRF2BPLQ9H1B7 796 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 C8orf33Q9H7E9 229 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 KCNK12Q9HB15 430 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 IL26Q9NPH9 171 aa15.75■□□□□ 0.11
PCDHA1-203ENST00000504120 TRBV2A0A0J9YWF9 115 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 I3L521 148 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 EEF1E1O43324 174 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 JRKO75564 520 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 FCER2P06734 321 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 ERCC1P07992 297 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 GTF2F2P13984 249 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 CLLU1OSQ5K130 101 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 LRRC69Q6ZNQ3 347 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 PRSS48Q7RTY5 328 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 VTCN1Q7Z7D3 282 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 KLBQ86Z14 1044 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 SYT11Q9BT88 431 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 LRRTM2O43300 516 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 GPR37L1O60883 481 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 RGNQ15493 299 aa15.74■□□□□ 0.11
PCDHA1-203ENST00000504120 MS4A15Q8N5U1 240 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms