RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 SPDYE7PQ495Y7 208 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 PRAMEF8Q5VWM4 474 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 PRAMEF7Q5VXH5 474 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 FAM83HQ6ZRV2 1179 aaPredicted RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 PARS2Q7L3T8 475 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 TRMT11Q7Z4G4 463 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 C17orf64Q86WR6 236 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 RBM45Q8IUH3 476 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 TCTE3Q8IZS6 198 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 MORN4Q8NDC4 146 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 DUSP18Q8NEJ0 188 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 VN1R2Q8NFZ6 395 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 OR4K5Q8NGD3 323 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 BBS10Q8TAM1 723 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TMEM163Q8TC26 289 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TRIM63Q969Q1 353 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 KATNB1Q9BVA0 655 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 SORBS1Q9BX66 1292 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 C11orf54Q9H0W9 315 aaPredicted RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 ZBP1Q9H171 429 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 OR52A5Q9H2C5 316 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 PCDHGB7Q9Y5F8 929 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 CCDC88CQ9P219 2028 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TRDV1A0A1B0GX56 115 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 KIAA0355O15063 1070 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 CASC3O15234 703 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 POP7O75817 140 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 SDC2P34741 201 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 DGKEP52429 567 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 CHRNEQ04844 493 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 ACSM1Q08AH1 577 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TMEM44Q2T9K0 475 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 MINDY4Q4G0A6 757 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 YIF1BQ5BJH7 314 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 ATAT1Q5SQI0 421 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 PAQR6Q6TCH4 344 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 SLC36A4Q6YBV0 504 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 ANKRD33Q7Z3H0 272 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 NUDT13Q86X67 352 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 ZNF547Q8IVP9 402 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 DCUN1D3Q8IWE4 304 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 GJD3Q8N144 294 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 UFD1Q92890 307 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 RAB8BQ92930 207 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 PRRC1Q96M27 445 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 FNDC11Q9BVV2 318 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 CFHR5Q9BXR6 569 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 GON7Q9BXV9 100 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 OR2AG1Q9H205 316 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 MVB12BQ9H7P6 319 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TRPV5Q9NQA5 729 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 MAN2C1Q9NTJ4 1040 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TDP1Q9NUW8 608 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TMEM98Q9Y2Y6 226 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 SPIN1Q9Y657 262 aaPredicted RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 NUP210Q8TEM1 1887 aaPredicted RBP14.15□□□□□ -0.14
SNF8-203ENST00000504000 PLA2G10O15496 165 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 SLC28A2O43868 658 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 SH3BP5O60239 455 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 PQBP1O60828 265 aaKnown RBP14.15□□□□□ -0.14
SNF8-203ENST00000504000 DRD2P14416 443 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 AZGP1P25311 298 aaKnown RBP14.15□□□□□ -0.14
SNF8-203ENST00000504000 IFNGR2P38484 337 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 ANXA11P50995 505 aaKnown RBP14.15□□□□□ -0.14
SNF8-203ENST00000504000 PIN1Q13526 163 aaPredicted RBP14.15□□□□□ -0.14
SNF8-203ENST00000504000 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.15□□□□□ -0.14
SNF8-203ENST00000504000 FLYWCH1Q4VC44 716 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 LY6G5CQ5SRR4 150 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 LCN1P1Q5VSP4 162 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 C22orf42Q6IC83 251 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 ACSM5Q6NUN0 579 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 TMEM64Q6YI46 380 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 PDZD3Q86UT5 571 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 ZNF485Q8NCK3 441 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 C17orf50Q8WW18 174 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 CAMK1GQ96NX5 476 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 TMEM246Q9BRR3 403 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 ARHGAP9Q9BRR9 750 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 PRRG3Q9BZD7 231 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 NDEL1Q9GZM8 345 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 SERHL2Q9H4I8 314 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 PPP1R3EQ9H7J1 279 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 FBXW2Q9UKT8 454 aa14.15□□□□□ -0.14
SNF8-203ENST00000504000 PRAMEF27A3QJZ7 478 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 SPINT1O43278 529 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 ALX3O95076 343 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 GALP22466 123 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 ERP29P30040 261 aaKnown RBP14.14□□□□□ -0.15
SNF8-203ENST00000504000 CCR2P41597 374 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 QPRTQ15274 297 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 BCDIN3DQ7Z5W3 292 aaKnown RBP14.14□□□□□ -0.15
SNF8-203ENST00000504000 PEX5LQ8IYB4 626 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 ANKRD53Q8N9V6 530 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 CD99L2Q8TCZ2 262 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 CYB5D2Q8WUJ1 264 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 TM9SF4Q92544 642 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 RGMAQ96B86 450 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 NUS1Q96E22 293 aa14.14□□□□□ -0.15
SNF8-203ENST00000504000 WFDC6Q9BQY6 131 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms