RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NTRK2Q16620 822 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 DESI1Q6ICB0 168 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 FAM111BQ6SJ93 734 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 MEX3BQ6ZN04 569 aaKnown RBP14.94□□□□□ -0.02
SCLT1-204ENST00000503215 TIFABQ6ZNK6 161 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 GALNT12Q8IXK2 581 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 PRR22Q8IZ63 422 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 SELENOMQ8WWX9 145 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 TM4SF18Q96CE8 201 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 JSRP1Q96MG2 331 aaPredicted RBP14.94□□□□□ -0.02
SCLT1-204ENST00000503215 SPOCK3Q9BQ16 436 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 C1QTNF3Q9BXJ4 246 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 OR10A5Q9H207 317 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 SLC6A15Q9H2J7 730 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 EPB41L4BQ9H329 900 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 LDAHQ9H6V9 325 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 ZNF703Q9H7S9 590 aaPredicted RBP14.94□□□□□ -0.02
SCLT1-204ENST00000503215 ZFP64Q9NPA5 681 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.94□□□□□ -0.02
SCLT1-204ENST00000503215 AHSPQ9NZD4 102 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 PCDHA9Q9Y5H5 950 aa14.94□□□□□ -0.02
SCLT1-204ENST00000503215 CCDC168Q8NDH2 2452 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 TRGV5A0A0B4J1U4 118 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 OR14I1A6ND48 311 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 OR6C76A6NM76 312 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 MANBAO00462 879 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 AQP7O14520 342 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 RIPK2O43353 540 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 ABHD2P08910 425 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 SERPINB3P29508 390 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 TRPC1P48995 793 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 MAN2A2P49641 1150 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 LIX1LQ8IVB5 337 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 C1orf52Q8N6N3 182 aaKnown RBP14.93□□□□□ -0.02
SCLT1-204ENST00000503215 CDYL2Q8N8U2 506 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 ADCY4Q8NFM4 1077 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 TMEM237Q96Q45 408 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 TREX2Q9BQ50 279 aaPredicted RBP14.93□□□□□ -0.02
SCLT1-204ENST00000503215 TTYH2Q9BSA4 534 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 TXLNGYQ9BZA5 131 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 ALKBH4Q9NXW9 302 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 ACAD8Q9UKU7 415 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 PHF3Q92576 2039 aaKnown RBP14.93□□□□□ -0.02
SCLT1-204ENST00000503215 FREM3P0C091 2139 aa14.93□□□□□ -0.02
SCLT1-204ENST00000503215 BCKDKO14874 412 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 SUSD5O60279 629 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 TRIM3O75382 744 aaPredicted RBP14.92□□□□□ -0.02
SCLT1-204ENST00000503215 NME6O75414 186 aaPredicted RBP14.92□□□□□ -0.02
SCLT1-204ENST00000503215 SUPT7LO94864 414 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 PORP16435 677 aaPredicted RBP14.92□□□□□ -0.02
SCLT1-204ENST00000503215 CHRNB4P30926 498 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 ADH7P40394 386 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 HTR6P50406 440 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 EXOSC7Q15024 291 aaKnown RBP14.92□□□□□ -0.02
SCLT1-204ENST00000503215 NNATQ16517 81 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 ZNF678Q5SXM1 525 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 SLC48A1Q6P1K1 146 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 PAGE2Q7Z2X7 111 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 GSPT2Q8IYD1 628 aaKnown RBP14.92□□□□□ -0.02
SCLT1-204ENST00000503215 LRRC25Q8N386 305 aaPredicted RBP14.92□□□□□ -0.02
SCLT1-204ENST00000503215 OR10Q1Q8NGQ4 319 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 ASB5Q8WWX0 329 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 DOHHQ9BU89 302 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 NXF5Q9H1B4 397 aaKnown RBP14.92□□□□□ -0.02
SCLT1-204ENST00000503215 EXO5Q9H790 373 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 CNIH4Q9P003 139 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 HEY2Q9UBP5 337 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 TRPS1Q9UHF7 1281 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 NPFFR2Q9Y5X5 522 aa14.92□□□□□ -0.02
SCLT1-204ENST00000503215 A0A0G2JNJ9 132 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 KDM4EB2RXH2 506 aaPredicted RBP14.91□□□□□ -0.02
SCLT1-204ENST00000503215 ERAL1O75616 437 aaKnown RBP14.91□□□□□ -0.02
SCLT1-204ENST00000503215 IGFBP2P18065 325 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 GPX3P22352 226 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 LTB4RQ15722 352 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 PRICKLE4Q2TBC4 344 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 C10orf62Q5T681 223 aaPredicted RBP14.91□□□□□ -0.02
SCLT1-204ENST00000503215 FNDC7Q5VTL7 733 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 HLA-DQA1Q5Y7H0 255 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 TRMT10CQ7L0Y3 403 aaKnown RBP14.91□□□□□ -0.02
SCLT1-204ENST00000503215 TAGAPQ8N103 731 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 SPPL2AQ8TCT8 520 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 MZB1Q8WU39 189 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 CHTF18Q8WVB6 975 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 DIO2Q92813 273 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 TP53INP1Q96A56 240 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 CNRIP1Q96F85 164 aaPredicted RBP14.91□□□□□ -0.02
SCLT1-204ENST00000503215 ANKRA2Q9H9E1 313 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 MAT2BQ9NZL9 334 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 Q9UFV3 132 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 BOKQ9UMX3 212 aaPredicted RBP14.91□□□□□ -0.02
SCLT1-204ENST00000503215 SNX6Q9UNH7 406 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 HCFC1P51610 2035 aa14.91□□□□□ -0.02
SCLT1-204ENST00000503215 MED12Q93074 2177 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 A0A1W2PPM1 405 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 HCN1O60741 890 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 PYGBP11216 843 aa14.9□□□□□ -0.02
SCLT1-204ENST00000503215 POU3F2P20265 443 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms